Evidence map›Paper›PMID 29443515›Full record

ArticleBiochemistry2018

Tuning Inner-Ear Tip-Link Affinity Through Alternatively Spliced Variants of Protocadherin-15.

Yoshie Narui, Marcos Sotomayor

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Cryo-EM reveals a right-handed double-helix dimer architecture of PCDH15.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. In situ structure of intestinal apical surface reveals nanobristles on microvilli.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Desmosome architecture derived from molecular dynamics simulations and cryo-electron tomography.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Structural determinants of protocadherin-15 mechanics and function in hearing and balance perception.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  14. Article
  15. Sensory Hair Cells: An Introduction to Structure and Physiology.Integrative and comparative biology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yoshie NaruiDepartment of Chemistry and Biochemistry , The Ohio State University , Columbus , Ohio 43210 , United States.ORCID 0000-0002-1136-282X
Marcos SotomayorDepartment of Chemistry and Biochemistry , The Ohio State University , Columbus , Ohio 43210 , United States.ORCID 0000-0002-3333-1805
The Ohio State University · US

Funding

Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Nanomechanics of Inner Ear Hair Cell TransductionR01DC015271 · NIDCD · UNIVERSITY OF CHICAGO · PI Marcos Sotomayor · 2016 to 2026
$3.5M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
FORCE SPECTROSCOPY AND STRUCTURAL BIOLOGY OF HAIR-CELL TIP LINKSR00DC012534 · NIDCD · OHIO STATE UNIVERSITY · PI SOTOMAYOR, MARCOS · 2013 to 2015
$745k
FORCE SPECTROSCOPY AND STRUCTURAL BIOLOGY OF HAIR-CELL TIP LINKSK99DC012534 · NIDCD · HARVARD MEDICAL SCHOOL · PI SOTOMAYOR, MARCOS · 2012 to 2012
$96k
NCRR NIH HHS S10 RR029205NIDCD NIH HHS K99 DC012534NIDCD NIH HHS R00 DC012534NIDCD NIH HHS R01 DC015271NIGMS NIH HHS P41 GM103403
6 · The paper itself

Abstract

Human hearing relies upon the tip-to-tip interaction of two nonclassical cadherins, protocadherin-15 (PCDH15) and cadherin-23 (CDH23). Together, these proteins form a filament called the tip link that connects neighboring stereocilia of mechanosensitive hair cells. As sound waves enter the cochlea, the stereocilia deflect and tension is applied to the tip link, opening nearby transduction channels. Disruption of the tip link by loud sound or calcium chelators eliminates transduction currents and illustrates that tip-link integrity is critical for mechanosensing. Tip-link remodeling after disruption is a dynamic process, which can lead to the formation of atypical complexes that incorporate alternatively spliced variants of PCDH15. These variants are categorized into six groups (N1-N6) based upon differences in the first two extracellular cadherin (EC) repeats. Here, we characterized the two N-terminal EC repeats of all PCDH15 variants (pcdh15(N1) to pcdh15(N6)) and combined these variants to test complex formation. We solved the crystal structure of a new complex composed of CDH23 EC1-2 (cdh23) and pcdh15(N2) at 2.3 Å resolution and compared it to the canonical cdh23-pcdh15(N1) complex. While there were subtle structural differences, the binding affinity between cdh23 and pcdh15(N2) is ∼6 times weaker than cdh23 and pcdh15(N1) as determined by surface plasmon resonance analysis. Steered molecular dynamics simulations predict that the unbinding force of the cdh23-pcdh15(N2) complex can be lower than the canonical tip link. Our results demonstrate that alternative heterophilic tip-link structures form stable protein-protein interactions in vitro and suggest that homophilic PCDH15-PCDH15 tip links form through the interaction of additional EC repeats.

Indexed as

Alternative SplicingAnimalsCadherin Related ProteinsCadherinsCrystallography, X-RayEar, InnerHair Cells, AuditoryHumansMechanotransduction, CellularMiceProtein BindingProtein ConformationProtein PrecursorsSurface Plasmon ResonanceCadherin Related ProteinsCadherinsCdh23 protein, mouseCDHR15 protein, mouseProtein Precursors

Identifiers

PMID29443515
PMCPMC5892193
OpenAlexW2787792243

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.