Evidence map›Paper›PMID 29443097›Full record

ArticleJournal of visualized experiments : JoVE2018

Variations on Negative Stain Electron Microscopy Methods: Tools for Tackling Challenging Systems.

Charlotte A Scarff, Martin J G Fuller, Rebecca F Thompson, Matthew G Iadanza

Erratum issuedAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed.

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  16. Expression, Purification, and In Vitro Analysis of Myosin.Methods in molecular biology (Clifton, N.J.) · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Charlotte A ScarffAstbury Centre for Structural Molecular Biology, University of Leeds.
Martin J G FullerAstbury Biostructure Laboratory, University of Leeds.
Rebecca F ThompsonAstbury Biostructure Laboratory, University of Leeds.
Matthew G IadanzaAstbury Centre for Structural Molecular Biology, University of Leeds; fbsmi@leeds.ac.uk.

Funding

British Heart Foundation PG/13/83/30485European Research Council 322408Wellcome TrustWellcome Trust 090932/Z/09/ZWellcome Trust 094232/Z/10/Z
6 · The paper itself

Abstract

Negative stain electron microscopy (EM) allows relatively simple and quick observation of macromolecules and macromolecular complexes through the use of contrast enhancing stain reagent. Although limited in resolution to a maximum of ~18 - 20 Å, negative stain EM is useful for a variety of biological problems and also provides a rapid means of assessing samples for cryo-electron microscopy (cryo-EM). The negative stain workflow is straightforward method; the sample is adsorbed onto a substrate, then a stain is applied, blotted, and dried to produce a thin layer of electron dense stain in which the particles are embedded. Individual samples can, however, behave in markedly different ways under varying staining conditions. This has led to the development of a large variety of substrate preparation techniques, negative staining reagents, and grid washing and blotting techniques. Determining the most appropriate technique for each individual sample must be done on a case-by-case basis and a microscopist must have access to a variety of different techniques to achieve the highest-quality negative stain results. Detailed protocols for two different substrate preparation methods and three different blotting techniques are provided, and an example of a sample that shows markedly different results depending on the method used is shown. In addition, the preparation of some common negative staining reagents, and two novel Lanthanide-based stains, is described with discussion regarding the use of each.

Indexed as

Microscopy, ElectronNegative Staining

Identifiers

PMID29443097
PMCPMC5912373

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.