Evidence map›Paper›PMID 29442997›Full record

ArticleeLife2018

Spatial structure of disordered proteins dictates conductance and selectivity in nuclear pore complex mimics.

Adithya N Ananth, Ankur Mishra, Steffen Frey, Arvind Dwarkasing, Roderick Versloot, Erik van der Giessen, Dirk Görlich, Patrick Onck, Cees Dekker

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 58 citations in OpenAlex.

  1. Threading of Single Protein Molecules Through a Solid-State Nanopore.Methods in molecular biology (Clifton, N.J.) · 2026
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  2. Article
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  4. Article
  5. Integrative mapping reveals molecular features underlying the mechanism of nucleocytoplasmic transport.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Phase separation of intrinsically disordered FG-Nups is driven by highly dynamic FG motifs.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. Article
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  15. Article
  16. Review
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  18. Article
  19. Structure and dynamics of nanoconfined water and aqueous solutions.The European physical journal. E, Soft matter · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Adithya N Ananth *Department of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, Netherlands.
Ankur Mishra *Zernike Institute for Advanced Materials, University of Groningen, Groningen, Netherlands.
Steffen FreyMax Planck Institute for Biophysical Chemistry, Göttingen, Germany.
Arvind DwarkasingDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, Netherlands.
Roderick VerslootDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, Netherlands.
Erik van der GiessenZernike Institute for Advanced Materials, University of Groningen, Groningen, Netherlands.ORCID http://orcid.org/0000-0002-8369-2254
Dirk GörlichMax Planck Institute for Biophysical Chemistry, Göttingen, Germany.ORCID https://orcid.org/0000-0002-4343-5210
Patrick OnckZernike Institute for Advanced Materials, University of Groningen, Groningen, Netherlands.
Cees DekkerDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, Netherlands.ORCID http://orcid.org/0000-0001-6273-071X
Delft University of Technology · NLUniversity of Groningen · NLMax Planck Institute for Biophysical Chemistry · DEUniversity of Oxford · GB

Funding

European Research Council grant number 669598
6 · The paper itself

Abstract

Nuclear pore complexes (NPCs) lined with intrinsically disordered FG-domains act as selective gatekeepers for molecular transport between the nucleus and the cytoplasm in eukaryotic cells. The underlying physical mechanism of the intriguing selectivity is still under debate. Here, we probe the transport of ions and transport receptors through biomimetic NPCs consisting of Nsp1 domains attached to the inner surface of solid-state nanopores. We examine both wildtype FG-domains and hydrophilic SG-mutants. FG-nanopores showed a clear selectivity as transport receptors can translocate across the pore whereas other proteins cannot. SG mutant pores lack such selectivity. To unravel this striking difference, we present coarse-grained molecular dynamics simulations that reveal that FG-pores exhibit a high-density, nonuniform protein distribution, in contrast to a uniform and significantly less-dense protein distribution in the SG-mutant. We conclude that the sequence-dependent density distribution of disordered proteins inside the NPC plays a key role for its conductivity and selective permeability.

Indexed as

Molecular MimicryNanoporesBiological TransportEukaryotic CellsIntrinsically Disordered ProteinsIonsMolecular Dynamics SimulationNuclear PoreIntrinsically Disordered ProteinsIonsbiophysicsFG-NupsnoneNuclear Pore Complexselective barriersolid-state nanoporesstructural biology

Identifiers

PMID29442997
PMCPMC5826291
OpenAlexW2787233956

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.