Evidence map›Paper›PMID 29442249›Full record

ArticleExtremophiles : life under extreme conditions2018

The vertical distribution of prokaryotes in the surface sediment of Jiaolong cold seep at the northern South China Sea.

Yuzhi Wu, Jian-Wen Qiu, Pei-Yuan Qian, Yong Wang

Abstract read
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In one paragraph

Article in Extremophiles : life under extreme conditions, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Yuzhi WuInstitute of Deep-Sea Science and Engineering, Chinese Academy of Sciences, Sanya, Hainan, China.
Jian-Wen QiuDepartment of Biology, Hong Kong Baptist University, Kowloon, Hong Kong SAR, China.
Pei-Yuan QianDivision of Life Science, Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong SAR, China. boqianpy@ust.hk.
Yong WangInstitute of Deep-Sea Science and Engineering, Chinese Academy of Sciences, Sanya, Hainan, China. wangy@idsse.ac.cn.
Chinese Academy of Sciences · CNHong Kong Baptist University · HKHong Kong University of Science and Technology · HK

Funding

National Natural Science Foundation of China No. 31460001National Natural Science Foundation of China No. 41476104
6 · The paper itself

Abstract

In deep-sea cold seeps, microbial communities are shaped by geochemical components in seepage solutions. In the present study, we report the composition of microbial communities and potential metabolic activities in the surface sediment of Jiaolong cold seep at the northern South China Sea. Pyrosequencing of 16S rRNA gene amplicons revealed that a majority of the microbial inhabitants of the surface layers (0-6 cm) were sulfur oxidizer bacteria Sulfurimonas and archaeal methane consumer ANME-1, while sulfate reducer bacteria SEEP-SRB1, ANME-1 and ANME-2 dominated the bottom layers (8-14 cm). The potential ecological roles of the microorganisms were further supported by the presence of functional genes for methane oxidation, sulfur oxidation, sulfur reduction and nitrate reduction in the metagenomes. Metagenomic analysis revealed a significant correlation between coverage of 16S rRNA gene of sulfur oxidizer bacteria, functional genes involved in sulfur oxidation and nitrate reduction in different layers, indicating that sulfur oxidizing may be coupled to nitrate reducing at the surface layers of Jiaolong seeping site. This is probably related to the sulfur oxidizers of Sulfurimonas and Sulfurovum, which may be the capacity of nitrate reduction or associated with unidentified syntrophic nitrate-reducing microbes in the surface of the cold seep.

Indexed as

MicrobiotaGeologic SedimentsMethaneNitratesOxidation-ReductionRNA, Ribosomal, 16SSeawaterSulfurMethaneNitratesRNA, Ribosomal, 16SSulfurANMECold seepMetagenomeSouth China SeaSRB

Identifiers

PMID29442249
OpenAlexW2791927242

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.