Evidence map›Paper›PMID 29440125›Full record

ArticleEMBO reports2018

Small interfering RNAs based on huntingtin trinucleotide repeats are highly toxic to cancer cells.

Andrea E Murmann, Quan Q Gao, William E Putzbach, Monal Patel, Elizabeth T Bartom, Calvin Y Law, Bryan Bridgeman, Siquan Chen, Kaylin M McMahon, C Shad Thaxton and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in EMBO reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
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  7. Article
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  15. DISE/6mer seed toxicity-a powerful anti-cancer mechanism with implications for other diseases.Journal of experimental & clinical cancer research : CR · 2021
    Review
  16. Review
  17. Article
  18. Article
  19. Huntington disease: Advances in the understanding of its mechanisms.Clinical parkinsonism & related disorders · 2020
    Review
  20. The role of the protein-RNA recognition code in neurodegeneration.Cellular and molecular life sciences : CMLS · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Andrea E MurmannDivision of Hematology/Oncology, Northwestern University, Chicago, IL, USA a-murmann@northwestern.edu m-peter@northwestern.edu.ORCID 0000-0001-7321-1528
Quan Q GaoDivision of Hematology/Oncology, Northwestern University, Chicago, IL, USA.
William E PutzbachDivision of Hematology/Oncology, Northwestern University, Chicago, IL, USA.
Monal PatelDivision of Hematology/Oncology, Northwestern University, Chicago, IL, USA.
Elizabeth T BartomDepartment of Biochemistry and Molecular Genetics, Northwestern University, Chicago, IL, USA.ORCID 0000-0002-5618-2582
Calvin Y LawDivision of Hematology/Oncology, Northwestern University, Chicago, IL, USA.
Bryan BridgemanDivision of Hematology/Oncology, Northwestern University, Chicago, IL, USA.
Siquan ChenCellular Screening Center, Institute for Genomics & Systems Biology, The University of Chicago, Chicago, IL, USA.
Kaylin M McMahonDepartment of Urology, Northwestern University, Chicago, IL, USA.
C Shad ThaxtonDepartment of Urology, Northwestern University, Chicago, IL, USA.
Marcus E PeterDivision of Hematology/Oncology, Northwestern University, Chicago, IL, USA a-murmann@northwestern.edu m-peter@northwestern.edu.ORCID 0000-0003-3216-036X
Northwestern University · USUniversity of Chicago · US

Funding

CARCINOGENESIS TRAINING PROGRAMT32CA009560 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Kathleen Janee Green · 1986 to 2026
$8.4M
DISE - a natural cancer surveillance mechanism - a new road to cancer therapyR35CA197450 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI PETER, MARCUS E. · 2015 to 2021
$6.2M
TRAINING PROGRAM IN SIGNAL TRANSDUCTION AND CANCERT32CA070085 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LEONIDAS C. PLATANIAS · 1997 to 2026
$5.7M
High Density Lipoprotein Nanoparticles for siRNA DeliveryR01CA167041 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI THAXTON, COLBY SHAD · 2012 to 2016
$1.6M
Cancer Nanotechnology Training ProgramT32CA186897 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WOLOSCHAK, GAYLE E. · 2015 to 2019
$1.2M
NCI NIH HHS R01 CA167041NCI NIH HHS R35 CA197450NCI NIH HHS T32 CA009560NCI NIH HHS T32 CA070085NCI NIH HHS T32 CA186897
6 · The paper itself

Abstract

Trinucleotide repeat (TNR) expansions in the genome cause a number of degenerative diseases. A prominent TNR expansion involves the triplet CAG in the huntingtin (HTT) gene responsible for Huntington's disease (HD). Pathology is caused by protein and RNA generated from the TNR regions including small siRNA-sized repeat fragments. An inverse correlation between the length of the repeats in HTT and cancer incidence has been reported for HD patients. We now show that siRNAs based on the CAG TNR are toxic to cancer cells by targeting genes that contain long reverse complementary TNRs in their open reading frames. Of the 60 siRNAs based on the different TNRs, the six members in the CAG/CUG family of related TNRs are the most toxic to both human and mouse cancer cells. siCAG/CUG TNR-based siRNAs induce cell death

Indexed as

AnimalsCell Line, TumorCell ProliferationDisease Models, AnimalHumansHuntingtin ProteinHuntington DiseaseMiceNeoplasmsOpen Reading FramesRNA, Small InterferingTrinucleotide Repeat ExpansionTrinucleotide RepeatsHTT protein, humanHuntingtin ProteinRNA, Small InterferingCAG repeatscell deathRNAiTLP nanoparticlestrinucleotide repeats

Identifiers

PMID29440125
PMCPMC5836092
OpenAlexW2786866790

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.