Evidence map›Paper›PMID 29439686›Full record

ArticleBMC biotechnology2018

Genetically encoded calcium indicator with NTnC-like design and enhanced fluorescence contrast and kinetics.

D A Doronin, N V Barykina, O M Subach, V P Sotskov, V V Plusnin, O A Ivleva, E A Isaakova, A M Varizhuk, G E Pozmogova, A Y Malyshev and 5 more

Open access · goldAbstract read
In one paragraph

Article in BMC biotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Review
  2. Article
  3. CaBLAM! A high-contrast bioluminescent CabioRxiv : the preprint server for biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 2 countries.

D A DoroninMoscow Institute of Physics and Technology, Moscow, 123182, Russia.
N V BarykinaMoscow Institute of Physics and Technology, Moscow, 123182, Russia.
O M SubachMoscow Institute of Physics and Technology, Moscow, 123182, Russia.ORCID 0000-0003-2720-7821
V P SotskovMoscow Institute of Physics and Technology, Moscow, 123182, Russia.
V V PlusninMoscow Institute of Physics and Technology, Moscow, 123182, Russia.
O A IvlevaMoscow Institute of Physics and Technology, Moscow, 123182, Russia.
E A IsaakovaMoscow Institute of Physics and Technology, Moscow, 123182, Russia.
A M VarizhukFederal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, 119435, Russia.
G E PozmogovaFederal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, 119435, Russia.
A Y MalyshevInstitute of Higher Nervous Activity and Neurophysiology of RAS, Moscow, 117485, Russia.
I V SmirnovInstitute of Higher Nervous Activity and Neurophysiology of RAS, Moscow, 117485, Russia.
K D PiatkevichMIT Media Lab, Massachusetts Institute of Technology, Cambridge, MA, USA.
K V AnokhinP.K. Anokhin Institute of Normal Physiology, Moscow, 125315, Russia.
G N EnikolopovMoscow Institute of Physics and Technology, Moscow, 123182, Russia. grigori.enikolopov@stonybrookmedicine.edu.
F V SubachMoscow Institute of Physics and Technology, Moscow, 123182, Russia. subach.fv@mipt.ru.
Moscow Institute of Physics and Technology · RUInstitute of Higher Nervous Activity and Neurophysiology · RUEngelhardt Institute of Molecular Biology · RUFederal Medical-Biological Agency · RULomonosov Moscow State University · RUMassachusetts Institute of Technology · US

Funding

Neural stem cells in the aging brainR01AG040209 · NIA · STATE UNIVERSITY NEW YORK STONY BROOK · PI ENIKOLOPOV, GRIGORI N · 2011 to 2015
$2.1M
NIA NIH HHS R01 AG040209
6 · The paper itself

Abstract

backgroundThe recently developed genetically encoded calcium indicator (GECI), called NTnC, has a novel design with reduced size due to utilization of the troponin C (TnC) as a Ca

resultsHerein, we developed a new NTnC-like GECI with enhanced fluorescence contrast and kinetics by replacing the mNeonGreen fluorescent subunit of the NTnC indicator with EYFP. Similar to NTnC, the developed indicator, named iYTnC2, has an inverted fluorescence response to Ca

conclusionsWe demonstrate that expanding the family of NTnC-like calcium indicators is a promising strategy for the development of the next generation of GECIs with smaller molecule size and lower Ca

Indexed as

AnimalsCalciumCell LineFluorescenceFluorometryHippocampusHumansHydrogen-Ion ConcentrationKineticsMaleMice, Inbred C57BLMicroscopy, FluorescenceMolecular ImagingNeuronsPatch-Clamp TechniquesProtein EngineeringCalciumRecombinant ProteinsTroponin CCalcium imagingGenetically encoded calcium indicatorProtein engineering

Identifiers

PMID29439686
PMCPMC5812234
OpenAlexW2801454733

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.