Evidence map›Paper›PMID 29439676›Full record

ArticleBMC evolutionary biology2018

Evolution of CYP2J19, a gene involved in colour vision and red coloration in birds: positive selection in the face of conservation and pleiotropy.

Hanlu Twyman, Staffan Andersson, Nicholas I Mundy

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
8.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 37 citations in OpenAlex.

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  8. Testosterone regulatesProceedings. Biological sciences · 2020
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  9. An Ancient Mutation in theInternational journal of molecular sciences · 2019
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  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Hanlu TwymanDepartment of Zoology, University of Cambridge, Cambridge, CB2 3EJ, UK.
Staffan AnderssonDepartment of Biological and Environmental Sciences, University of Gothenburg, 40530, Göteborg, Sweden.
Nicholas I MundyDepartment of Zoology, University of Cambridge, Cambridge, CB2 3EJ, UK. nim21@cam.ac.uk.
University of Cambridge · GBUniversity of Gothenburg · SE

Funding

Biotechnology and Biological Sciences Research Council DTP
6 · The paper itself

Abstract

backgroundExaggerated signals, such as brilliant colours, are usually assumed to evolve through antagonistic coevolution between senders and receivers, but the underlying genetic mechanisms are rarely known. Here we explore a recently identified "redness gene", CYP2J19, that is highly interesting in this context since it encodes a carotenoid-modifying enzyme (a C4 ketolase involved in both colour signalling and colour discrimination in the red (long wavelength) spectral region.)

resultsA single full-length CYP2J19 was retrieved from 43 species out of 70 avian genomes examined, representing all major avian clades. In addition, CYP2J19 sequences from 13 species of weaverbirds (Ploceidae), seven of which have red C4-ketocarotenoid coloration were analysed. Despite the conserved retinal function and pleiotropy of CYP2J19, analyses indicate that the gene has been positively selected throughout the radiation of birds, including sites within functional domains described in related CYP (cytochrome P450) loci. Analyses of eight further CYP loci across 25 species show that positive selection is common in this gene family in birds. There was no evidence for a change in selection pressure on CYP2J19 following co-option for red coloration in the weaverbirds.

conclusionsThe results presented here are consistent with an ancestral conserved function of CYP2J19 in the pigmentation of red retinal oil droplets used for colour vision, and its subsequent co-option for red integumentary coloration. The cause of positive selection on CYP2J19 is unclear, but may be partly related to compensatory mutations related to selection at the adjacent gene CYP2J40.

Indexed as

Conserved SequenceEvolution, MolecularGenetic PleiotropyAnimalsBirdsColor VisionCytochrome P-450 Enzyme SystemGenetic LociGenomePigmentationSpecies SpecificityCytochrome P-450 Enzyme SystemBirdsCYPCYP2J19PleiotropyRed carotenoid colorationRetinal oil dropletsSelection analysis

Identifiers

PMID29439676
PMCPMC5812113
OpenAlexW2798259656

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.