Evidence map›Paper›PMID 29436829›Full record

ArticleThe journal of physical chemistry. A2018

Deamidation of Protonated Asparagine-Valine Investigated by a Combined Spectroscopic, Guided Ion Beam, and Theoretical Study.

L J M Kempkes, G C Boles, J Martens, G Berden, P B Armentrout, J Oomens

Abstract read
In one paragraph

Article in The journal of physical chemistry. A, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Role of site-directed mutagenesis and adjuvants in the stability and potency of anthrax protective antigen.Saudi pharmaceutical journal : SPJ : the official publication of the Saudi Pharmaceutical Society · 2022
    Review
  2. Article
  3. Article
  4. Protonated Asparaginyl-Alanine Decomposition: a TCID, SORI-CID, and Computational Analysis.Journal of the American Society for Mass Spectrometry · 2018
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

L J M KempkesFELIX Laboratory, Institute for Molecules and Materials , Radboud University , Toernooiveld 7c , 6525 ED , Nijmegen , The Netherlands.
G C BolesDepartment of Chemistry , University of Utah , 315 South 1400 East , Room 2020, Salt Lake City , Utah 84112 , United States.
J MartensFELIX Laboratory, Institute for Molecules and Materials , Radboud University , Toernooiveld 7c , 6525 ED , Nijmegen , The Netherlands.ORCID http://orcid.org/0000-0001-9537-4117
G BerdenFELIX Laboratory, Institute for Molecules and Materials , Radboud University , Toernooiveld 7c , 6525 ED , Nijmegen , The Netherlands.ORCID http://orcid.org/0000-0003-1500-922X
P B ArmentroutDepartment of Chemistry , University of Utah , 315 South 1400 East , Room 2020, Salt Lake City , Utah 84112 , United States.ORCID http://orcid.org/0000-0003-2953-6039
J OomensFELIX Laboratory, Institute for Molecules and Materials , Radboud University , Toernooiveld 7c , 6525 ED , Nijmegen , The Netherlands.ORCID http://orcid.org/0000-0002-2717-1278

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Peptide deamidation of asparaginyl residues is a spontaneous post-translational modification that is believed to play a role in aging and several diseases. It is also a well-known small-molecule loss channel in the MS/MS spectra of protonated peptides. Here we investigate the deamidation reaction, as well as other decomposition pathways, of the protonated dipeptide asparagine-valine ([AsnVal + H]

Indexed as

Models, MolecularProtonsAmidesAsparagineMolecular ConformationSpectrophotometry, InfraredTandem Mass SpectrometryValineAmidesAsparagineProtonsValine

Identifiers

PMID29436829
PMCPMC5846081

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.