Evidence map›Paper›PMID 29435937›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2018

Laser Capture Microdissection of Epithelium from a Wound Healing Model for MicroRNA Analysis.

Alyne Simões, Zujian Chen, Yan Zhao, Lin Chen, Virgilia Macias, Luisa A DiPietro, Xiaofeng Zhou

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alyne SimõesCenter for Wound Healing & Tissue Regeneration, Department of Periodontics, College of Dentistry, University of Illinois at Chicago, Chicago, IL, USA.
Zujian ChenCenter for Molecular Biology of Oral Diseases, Department of Periodontics, College of Dentistry, University of Illinois at Chicago, Chicago, IL, USA.
Yan ZhaoCenter for Wound Healing & Tissue Regeneration, Department of Periodontics, College of Dentistry, University of Illinois at Chicago, Chicago, IL, USA.
Lin ChenCenter for Wound Healing & Tissue Regeneration, Department of Periodontics, College of Dentistry, University of Illinois at Chicago, Chicago, IL, USA.
Virgilia MaciasDepartment of Pathology, College of Medicine, University of Illinois at Chicago, Chicago, IL, USA.
Luisa A DiPietroCenter for Wound Healing & Tissue Regeneration, Department of Periodontics, College of Dentistry, University of Illinois at Chicago, Chicago, IL, USA.
Xiaofeng ZhouCenter for Wound Healing & Tissue Regeneration, Department of Periodontics, College of Dentistry, University of Illinois at Chicago, Chicago, IL, USA. xfzhou@uic.edu.

Funding

ANGIOGENESIS IN WOUND REPAIRR01GM050875 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI DIPIETRO, LUISA A · 1999 to 2020
$6.6M
MicroRNA regulation of the injury response in oral mucosaR21DE025926 · NIDCR · UNIVERSITY OF ILLINOIS AT CHICAGO · PI DIPIETRO, LUISA A, ZHOU, XIAOFENG · 2016 to 2017
$440k
Laser microdissection for molecular analysis of oral, dental and craniofacial disS10RR026493 · NCRR · UNIVERSITY OF ILLINOIS AT CHICAGO · PI ZHOU, XIAOFENG · 2010 to 2010
$237k
MicroRNA determinants of oral cancer detectionR03CA171436 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI ZHOU, XIAOFENG · 2013 to 2014
$157k
NCI NIH HHS R03 CA171436NCRR NIH HHS S10 RR026493NIDCR NIH HHS R21 DE025926NIGMS NIH HHS R01 GM050875
6 · The paper itself

Abstract

MicroRNAs are ~22 nucleotide-long noncoding RNAs influencing many cellular processes (including wound healing) by their regulatory functions on gene expression. The ability to analyze microRNA in different cells at the wound site is essential for understanding the critical role(s) of microRNA during various phases of wound healing. Laser capture micro-dissection (LCM) is an effective method to distinguish between relevant and non-relevant cells or tissues and enables the researcher to obtain homogeneous, ultra-pure samples from heterogeneous starting material. We present here our protocol for procuring epithelial cells from a mouse wound healing model using a Leica LMD7000 Laser Microdissection system, as well as the RNA isolation and downstream microRNA analysis. Using this method, researchers can selectively and routinely analyze regions of interest down to single cells to obtain results that are relevant, reproducible, and specific.

Indexed as

AnimalsEpithelial CellsEpitheliumGene Expression ProfilingLaser Capture MicrodissectionMiceMicroRNAsReal-Time Polymerase Chain ReactionWound HealingMicroRNAsEpithelial cellsFrozen sampleLCMMicroRNAMouseRNA isolationWound healing

Identifiers

PMID29435937
PMCPMC5997841

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.