Evidence map›Paper›PMID 29435649›Full record

ArticleExtremophiles : life under extreme conditions2018

Genome sequence and description of Haloferax massiliense sp. nov., a new halophilic archaeon isolated from the human gut.

Saber Khelaifia, Aurelia Caputo, Claudia Andrieu, Frederique Cadoret, Nicholas Armstrong, Caroline Michelle, Jean-Christophe Lagier, Felix Djossou, Pierre-Edouard Fournier, Didier Raoult

Abstract read
In one paragraph

Article in Extremophiles : life under extreme conditions, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Introducing clinical nanorachaeaology: Isolation by co-culture ofCurrent research in microbial sciences · 2022
    Article
  6. Halophilic ArchaeaFrontiers in immunology · 2022
    Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Saber KhelaifiaUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS, (UMR 7278) IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Aix-Marseille Université, 19-21 Boulevard Jean Moulin, 13385, Marseille Cedex 5, France. khelaifia_saber@yahoo.fr.
Aurelia CaputoUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS, (UMR 7278) IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Aix-Marseille Université, 19-21 Boulevard Jean Moulin, 13385, Marseille Cedex 5, France.
Claudia AndrieuUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS, (UMR 7278) IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Aix-Marseille Université, 19-21 Boulevard Jean Moulin, 13385, Marseille Cedex 5, France.
Frederique CadoretUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS, (UMR 7278) IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Aix-Marseille Université, 19-21 Boulevard Jean Moulin, 13385, Marseille Cedex 5, France.
Nicholas ArmstrongUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS, (UMR 7278) IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Aix-Marseille Université, 19-21 Boulevard Jean Moulin, 13385, Marseille Cedex 5, France.
Caroline MichelleUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS, (UMR 7278) IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Aix-Marseille Université, 19-21 Boulevard Jean Moulin, 13385, Marseille Cedex 5, France.
Jean-Christophe LagierUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS, (UMR 7278) IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Aix-Marseille Université, 19-21 Boulevard Jean Moulin, 13385, Marseille Cedex 5, France.
Felix DjossouInfectious and Tropical Diseases Department, Centre Hospitalier Andrée-Rosemon, Cayenne, French Guiana.
Pierre-Edouard FournierUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS, (UMR 7278) IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Aix-Marseille Université, 19-21 Boulevard Jean Moulin, 13385, Marseille Cedex 5, France.
Didier RaoultUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS, (UMR 7278) IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Aix-Marseille Université, 19-21 Boulevard Jean Moulin, 13385, Marseille Cedex 5, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

By applying the culturomics concept and using culture conditions containing a high salt concentration, we herein isolated the first known halophilic archaeon colonizing the human gut. Here we described its phenotypic and biochemical characterization as well as its genome annotation. Strain Arc-Hr

Indexed as

Genome, ArchaealFemaleHaloferaxHumansIntestinesMolecular Sequence AnnotationYoung AdultCulturomicsHaloferax massilienseHalophilic archaeaTaxono-genomics

Identifiers

PMID29435649
PMCPMC5862939

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.