Evidence map›Paper›PMID 29435303›Full record

ArticleMolecular and clinical oncology2018

Non-small-cell lung cancer pathological subtype-related gene selection and bioinformatics analysis based on gene expression profiles.

Jiangpeng Chen, Xiaoqi Dong, Xun Lei, Yinyin Xia, Qing Zeng, Ping Que, Xiaoyan Wen, Shan Hu, Bin Peng

Open access · diamondAbstract read
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Article in Molecular and clinical oncology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jiangpeng ChenSchool of Public Health and Management, Chongqing Medical University, Chongqing 400016, P.R. China.
Xiaoqi DongDepartment of Respiratory Diseases, The First Affiliated Hospital of Zhejiang University, Hangzhou, Zhejiang 310003, P.R. China.
Xun LeiSchool of Public Health and Management, Chongqing Medical University, Chongqing 400016, P.R. China.
Yinyin XiaSchool of Public Health and Management, Chongqing Medical University, Chongqing 400016, P.R. China.
Qing ZengSchool of Public Health and Management, Chongqing Medical University, Chongqing 400016, P.R. China.
Ping QueSchool of Public Health and Management, Chongqing Medical University, Chongqing 400016, P.R. China.
Xiaoyan WenSchool of Public Health and Management, Chongqing Medical University, Chongqing 400016, P.R. China.
Shan HuSchool of Public Health and Management, Chongqing Medical University, Chongqing 400016, P.R. China.
Bin PengSchool of Public Health and Management, Chongqing Medical University, Chongqing 400016, P.R. China.
Chongqing Medical University · CNChongqing Public Health Medical Center · CNFirst Affiliated Hospital Zhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lung cancer is one of the most common malignant diseases and a major threat to public health on a global scale. Non-small-cell lung cancer (NSCLC) has a higher degree of malignancy and a lower 5-year survival rate compared with that of small-cell lung cancer. NSCLC may be mainly divided into two pathological subtypes, adenocarcinoma and squamous cell carcinoma. The aim of the present study was to identify disease genes based on the gene expression profile and the shortest path analysis of weighted functional protein association networks with the existing protein-protein interaction data from the Search Tool for the Retrieval of Interacting Genes. The gene expression profile (GSE10245) was downloaded from the National Center for Biotechnology Information Gene Expression Omnibus database, including 40 lung adenocarcinoma and 18 lung squamous cell carcinoma tissues. A total of 8 disease genes were identified using Naïve Bayesian Classifier based on the Maximum Relevance Minimum Redundancy feature selection method following preprocessing. An additional 21 candidate genes were selected using the shortest path analysis with Dijkstra's algorithm. The

Indexed as

bioinformatics analysisfeature selectionmicroarraynon-small-cell lung cancerpathway

Identifiers

PMID29435303
PMCPMC5774457
OpenAlexW2769083100

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.