Evidence map›Paper›PMID 29435100›Full record

ArticleStandards in genomic sciences2018

Complete genome sequence of

Jakub Ridl, Jachym Suman, Serena Fraraccio, Miluse Hradilova, Michal Strejcek, Tomas Cajthaml, Andrea Zubrova, Tomas Macek, Hynek Strnad, Ondrej Uhlik

Open access · goldAbstract readCase Reports
In one paragraph

Article in Standards in genomic sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. A New ICEMicroorganisms · 2021
    Article
  8. Review
  9. Article
  10. Complete genome sequence of the biocontrol agent Serratia marcescens strain N4-5 uncovers an assembly artefact.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2021
    Article
  11. Article
  12. Article
  13. Exploring the Potential ofFrontiers in microbiology · 2021
    Article
  14. Biphenyl 2,3-Dioxygenase inFrontiers in microbiology · 2021
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Jakub Ridl *1Department of Genomics and Bioinformatics, Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Prague, Czech Republic.
Jachym Suman *2Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic.
Serena Fraraccio2Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic.
Miluse Hradilova1Department of Genomics and Bioinformatics, Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Prague, Czech Republic.
Michal Strejcek2Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic.
Tomas Cajthaml3Laboratory of Environmental Biotechnology, Institute of Microbiology, Academy of Sciences of the Czech Republic, Prague, Czech Republic.
Andrea Zubrova2Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic.
Tomas Macek2Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic.
Hynek Strnad1Department of Genomics and Bioinformatics, Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Prague, Czech Republic.
Ondrej Uhlik2Department of Biochemistry and Microbiology, Faculty of Food and Biochemical Technology, University of Chemistry and Technology, Prague, Czech Republic.ORCID 0000-0002-0506-202X
University of Chemistry and Technology, Prague · CZCzech Academy of Sciences, Institute of Molecular Genetics · CZCzech Academy of Sciences · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, following its isolation from contaminated soil, the genomic sequence of

Indexed as

Aromatic compoundsben genesBiodegradationBioremediationBiphenylbph genesChlorobenzoic acids (CBAs)cis-1,2-dichloroethylene (cDCE)DioxygenaseGenomeMALDI-TOF MSMonooxygenasephe genesPhenolPolychlorinated biphenyls (PCBs)PseudomonadaceaePseudomonas alcaliphila JAB1

Identifiers

PMID29435100
PMCPMC5796565
OpenAlexW2793098806

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.