Evidence map›Paper›PMID 29434599›Full record

ArticleFrontiers in immunology2018

RNA-Seq Analysis of IL-1B and IL-36 Responses in Epidermal Keratinocytes Identifies a Shared MyD88-Dependent Gene Signature.

William R Swindell, Maria A Beamer, Mrinal K Sarkar, Shannon Loftus, Joseph Fullmer, Xianying Xing, Nicole L Ward, Lam C Tsoi, Michelle J Kahlenberg, Yun Liang and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
11.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 105 citations in OpenAlex.

  1. Review
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  4. Stack: In-Context Learning of Single-Cell Biology.bioRxiv : the preprint server for biology · 2026
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  13. Generalized Pustular Psoriasis and Systemic Organ Dysfunctions.International journal of molecular sciences · 2024
    Review
  14. Article
  15. The Critical Role of Pyroptosis in Peri-Implantitis.Journal of inflammation research · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Inflammation and Psoriasis: A Comprehensive Review.International journal of molecular sciences · 2023
    Review

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

William R SwindellHeritage College of Osteopathic Medicine, Ohio University, Athens, OH, United States.
Maria A BeamerDepartment of Dermatology, University of Michigan, Ann Arbor, MI, United States.
Mrinal K SarkarDepartment of Dermatology, University of Michigan, Ann Arbor, MI, United States.
Shannon LoftusDepartment of Dermatology, University of Michigan, Ann Arbor, MI, United States.
Joseph FullmerDepartment of Dermatology, University of Michigan, Ann Arbor, MI, United States.
Xianying XingDepartment of Dermatology, University of Michigan, Ann Arbor, MI, United States.
Nicole L WardDepartment of Dermatology, Case Western Reserve University, Cleveland, OH, United States.
Lam C TsoiDepartment of Dermatology, University of Michigan, Ann Arbor, MI, United States.
Michelle J KahlenbergDepartment of Internal Medicine, Division of Rheumatology, University of Michigan, Ann Arbor, MI, United States.
Yun LiangDepartment of Dermatology, University of Michigan, Ann Arbor, MI, United States.
Johann E GudjonssonDepartment of Dermatology, University of Michigan, Ann Arbor, MI, United States.
University of Michigan–Ann Arbor · USCase Western Reserve University · USOhio University · US

Funding

Genetic and Genomic Dissection of Psoriatic ArthritisR01AR063611 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD, GLADMAN, DAFNA D · 2012 to 2023
$6.2M
TRAINING PROGRAM IN CELL AND MOLECULAR DERMATOLOGYT32AR007197 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI JAMES TILFORD ELDER, Sunny Y Wong · 1986 to 2026
$4.2M
Characterization of Interferon Kappa as a Novel Target in Cutaneous LupusR01AR071384 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Joanne Michelle Kahlenberg · 2017 to 2026
$3.6M
Role of IL-13 and the IL-13 Associated rs20541 Risk Variant in the Pathogenesis of PsoriasisR01AR069071 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GUDJONSSON, JOHANN ELI · 2015 to 2019
$2.1M
IL-17C mediated mechanisms of inflammationR01AR062546 · NIAMS · CASE WESTERN RESERVE UNIVERSITY · PI WARD, NICOLE LEANNE · 2013 to 2017
$1.9M
Remote Inflammation and AtherothrombosisR01AR063437 · NIAMS · CASE WESTERN RESERVE UNIVERSITY · PI WARD, NICOLE LEANNE · 2012 to 2016
$1.7M
Functional Genomics of PsoriasisR01AR065183 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ELDER, JAMES TILFORD · 2013 to 2016
$1.7M
The Role of Innate Immunity in Systemic and Cutaneous LupusK08AR063668 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KAHLENBERG, JOANNE MICHELLE · 2013 to 2017
$736k
Role of the Psoriasis Associated IL23R Risk Variants on Th17 Biology and FunctionK08AR060802 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GUDJONSSON, JOHANN ELI · 2011 to 2015
$636k
Neurogenic inflammation and psoriasiform dermatitisR21AR063852 · NIAMS · CASE WESTERN RESERVE UNIVERSITY · PI WARD, NICOLE LEANNE · 2013 to 2014
$370k
Understanding Transcriptional Connections between Cutaneous and Systemic LupusR03AR066337 · NIAMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KAHLENBERG, JOANNE MICHELLE · 2014 to 2016
$233k
NIAMS NIH HHS K08 AR060802NIAMS NIH HHS K08 AR063668NIAMS NIH HHS R01 AR062546NIAMS NIH HHS R01 AR069071NIAMS NIH HHS R01 AR071384NIAMS NIH HHS R03 AR066337
6 · The paper itself

Abstract

IL-36 cytokines have recently emerged as mediators of inflammation in autoimmune conditions including psoriasis vulgaris (PsV) and generalized pustular psoriasis (GPP). This study used RNA-seq to profile the transcriptome of primary epidermal keratinocytes (KCs) treated with IL-1B, IL-36A, IL-36B, or IL-36G. We identified some early IL-1B-specific responses (8 h posttreatment), but nearly all late IL-1B responses were replicated by IL-36 cytokines (24 h posttreatment). Type I and II interferon genes exhibited time-dependent response patterns, with early induction (8 h) followed by no response or repression (24 h). Altogether, we identified 225 differentially expressed genes (DEGs) with shared responses to all 4 cytokines at both time points (8 and 24 h). These involved upregulation of ligands (

Indexed as

AutoimmunityBiomarkersCells, CulturedCytokinesDermatitisDisease SusceptibilityEpidermal CellsGene Expression ProfilingGene Expression RegulationHigh-Throughput Nucleotide SequencingHumansImmunity, MucosalInterferonsInterleukin-1Interleukin-1betaKeratinocytesBiomarkersCytokinesETS1 protein, humanInterferonsInterleukin-1Interleukin-1betainterleukin 36, humanMyeloid Differentiation Factor 88NF-kappa BProto-Oncogene Protein c-ets-1epidermisETS1IL-1inflammatory bowel diseasekeratinocytesNF-kappaBRNA-seq

Identifiers

PMID29434599
PMCPMC5796909
OpenAlexW2793271483

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.