Evidence map›Paper›PMID 29434328›Full record

ArticleScientific reports2018

Plastic roles of phenylalanine and tyrosine residues of TLS/FUS in complex formation with the G-quadruplexes of telomeric DNA and TERRA.

Keiko Kondo, Tsukasa Mashima, Takanori Oyoshi, Ryota Yagi, Riki Kurokawa, Naohiro Kobayashi, Takashi Nagata, Masato Katahira

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
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  5. Coding relationship links RNA G-quadruplexes and protein RGG motifs in RNA-binding protein autoregulation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Neurological Diseases can be Regulated by Phase Separation.Reviews of physiology, biochemistry and pharmacology · 2025
    Review
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  11. Review
  12. Article
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  14. Article
  15. Dynamics Studies of DNA with Non-canonical Structure Using NMR Spectroscopy.International journal of molecular sciences · 2020
    Review
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Keiko KondoInstitute of Advanced Energy, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan.
Tsukasa MashimaInstitute of Advanced Energy, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan.
Takanori OyoshiDepartment of Chemistry, Graduate School of Science, Shizuoka University, 836 Ohya, Suruga, Shizuoka, 422-8529, Japan.
Ryota YagiDepartment of Chemistry, Graduate School of Science, Shizuoka University, 836 Ohya, Suruga, Shizuoka, 422-8529, Japan.
Riki KurokawaDivision of Gene Structure and Function, Research Center for Genomic Medicine, Saitama Medical University, 1397-1 Yamane, Hidaka-shi, Saitama, 350-1241, Japan.
Naohiro KobayashiInstitute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Takashi NagataInstitute of Advanced Energy, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan.
Masato KatahiraInstitute of Advanced Energy, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan. katahira.masato.6u@kyoto-u.ac.jp.
Kyoto University · JPShizuoka University · JPOsaka University · JPSaitama Medical University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The length of a telomere is regulated via elongation and shortening processes. Telomeric DNA and telomeric repeat-containing RNA (TERRA), which both contain G-rich repeated sequences, form G-quadruplex structures. Previously, translocated in liposarcoma (TLS) protein, also known as fused in sarcoma (FUS) protein, was found to form a ternary complex with the G-quadruplex structures of telomeric DNA and TERRA. We then showed that the third RGG motif of TLS, the RGG3 domain, is responsible for the complex formation. However, the structural basis for their binding remains obscure. Here, NMR-based binding assaying revealed the interactions in the binary and ternary complexes of RGG3 with telomeric DNA or/and TERRA. In the ternary complex, tyrosine bound exclusively to TERRA, while phenylalanine bound exclusively to telomeric DNA. Thus, tyrosine and phenylalanine each play a central role in the recognition of TERRA and telomeric DNA, respectively. Surprisingly in the binary complexes, RGG3 used both tyrosine and phenylalanine residues to bind to either TERRA or telomeric DNA. We propose that the plastic roles of tyrosine and phenylalanine are important for RGG3 to efficiently form the ternary complex, and thereby regulate the telomere shortening.

Indexed as

Binding SitesG-QuadruplexesHumansModels, MolecularPhenylalanineProtein BindingProtein DomainsProtein MultimerizationRNARNA-Binding Protein FUSTelomereTelomere ShorteningTyrosineFUS protein, humanPhenylalanineRNARNA-Binding Protein FUSTyrosine

Identifiers

PMID29434328
PMCPMC5809584
OpenAlexW2806353807

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.