Evidence map›Paper›PMID 29433383›Full record

ArticleBioengineered2018

Mycobacterium tuberculosis H37Rv infection regulates alternative splicing in Macrophages.

Wei Zhang, Chen Niu, Rui-Yang Fu, Zheng-Yu Peng

Open access · goldAbstract read
In one paragraph

Article in Bioengineered, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Journal of Cancer · 2025
    Review
  3. Article
  4. Review
  5. Article
  6. Host factorFrontiers in immunology · 2024
    Article
  7. Frontiers in immunology · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Wei Zhanga School of Medicine, Zhejiang University City College , Hangzhou , China.
Chen Niub MOE & MOH Key Laboratory of Medical Molecular Virology, School of Basic Medical Sciences, Fudan University , Shanghai , China.
Rui-Yang Fuc Department of Rehabilitation , Traditional Chinese Medical Hospital of HuZhou , HuZhou , China.
Zheng-Yu Pengd Institute of Biomedical Sciences, Fudan University , Shanghai , China.
Fudan University · CNShanghai Traditional Chinese Medicine Hospital · CNZhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveThe objective of this study was to evaluate the expression of genes encoding SR proteinsand alternative splicing of IL4 and TLR4 in Mycobacterium tuberculosis (M. tb) H37Rv-infected macrophages. MATERIALS AND

methodsTHP-1 cells were induced to differentiate into macrophages with 200 nM PMA, and H37Rv strains were used for macrophage infection. After RNA extraction, qRT-PCR was performed to evaluate the expression of many SR proteins as well as the alternative splicing of IL4 and TLR4.

resultsIL4 and TLR4 play significant roles in host immunity to tuberculosis. The level of IL-4 splice variants in THP-1 cells increased after M. tb H37Rv infection. Three splice variants of TLR4 were detected in M. tb-infected THP-1 cells, when compared with uninfected controls; the expression level of these splicing variants in M. tb-infected THP-1 cell was down-regulated. Since SR proteins are RNA-binding proteins that regulate RNA splicing, the expression of SR proteins was examined, and SRSF2 and SRSF3 were significantly down-regulated. In addition, splicing factors SRp75 and SF3a were also significantly down-regulated post M. tb infection.

conclusionOur findings indicate that alternative splicing may be involved in host gene regulation post M. tb infection of macrophage cells.

Indexed as

Host-Pathogen InteractionsRNA SplicingCell DifferentiationHumansInterleukin-4MacrophagesMycobacterium tuberculosisRNA Splicing FactorsSerine-Arginine Splicing FactorsSignal TransductionTetradecanoylphorbol AcetateTHP-1 CellsToll-Like Receptor 4IL4 protein, humanInterleukin-4RNA Splicing FactorsSerine-Arginine Splicing FactorsSF3A1 protein, humanSRSF2 protein, humanSRSF3 protein, humanSRSF4 protein, humanTetradecanoylphorbol AcetateTLR4 protein, humanToll-Like Receptor 4alternative splicingIL4Mycobacterium tuberculosisSR proteinsTLR4

Identifiers

PMID29433383
PMCPMC5972922
OpenAlexW2790732440

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.