Evidence map›Paper›PMID 29432616›Full record

ArticleNucleic acids research2018

Autoregulation of mazEF expression underlies growth heterogeneity in bacterial populations.

Nela Nikolic, Tobias Bergmiller, Alexandra Vandervelde, Tanino G Albanese, Lendert Gelens, Isabella Moll

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. MazEF Homologs inToxins · 2024
    Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Archives of molecular biology and genetics · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Nela NikolicDepartment of Microbiology, Immunobiology and Genetics, Max F. Perutz Laboratories, University of Vienna, Vienna BioCenter (VBC), 1030 Vienna, Austria.
Tobias BergmillerInstitute of Science and Technology Austria (IST Austria), 3400 Klosterneuburg, Austria.
Alexandra VanderveldeLaboratory of Dynamics in Biological Systems, Department of Cellular and Molecular Medicine, University of Leuven, 3000 Leuven, Belgium.
Tanino G AlbaneseDepartment of Microbiology, Immunobiology and Genetics, Max F. Perutz Laboratories, University of Vienna, Vienna BioCenter (VBC), 1030 Vienna, Austria.
Lendert GelensLaboratory of Dynamics in Biological Systems, Department of Cellular and Molecular Medicine, University of Leuven, 3000 Leuven, Belgium.
Isabella MollDepartment of Microbiology, Immunobiology and Genetics, Max F. Perutz Laboratories, University of Vienna, Vienna BioCenter (VBC), 1030 Vienna, Austria.
University of Vienna · ATKU Leuven · BEInstitute of Science and Technology Austria · AT

Funding

Austrian Science Fund FWF M 1697Austrian Science Fund FWF P 22249Austrian Science Fund FWF P 27043
6 · The paper itself

Abstract

The MazF toxin sequence-specifically cleaves single-stranded RNA upon various stressful conditions, and it is activated as a part of the mazEF toxin-antitoxin module in Escherichia coli. Although autoregulation of mazEF expression through the MazE antitoxin-dependent transcriptional repression has been biochemically characterized, less is known about post-transcriptional autoregulation, as well as how both of these autoregulatory features affect growth of single cells during conditions that promote MazF production. Here, we demonstrate post-transcriptional autoregulation of mazF expression dynamics by MazF cleaving its own transcript. Single-cell analyses of bacterial populations during ectopic MazF production indicated that two-level autoregulation of mazEF expression influences cell-to-cell growth rate heterogeneity. The increase in growth rate heterogeneity is governed by the MazE antitoxin, and tuned by the MazF-dependent mazF mRNA cleavage. Also, both autoregulatory features grant rapid exit from the stress caused by mazF overexpression. Time-lapse microscopy revealed that MazF-mediated cleavage of mazF mRNA leads to increased temporal variability in length of individual cells during ectopic mazF overexpression, as explained by a stochastic model indicating that mazEF mRNA cleavage underlies temporal fluctuations in MazF levels during stress.

Indexed as

HomeostasisAnti-Bacterial AgentsAntitoxinsBacterial ToxinsCell DivisionDNA-Binding ProteinsEndoribonucleasesEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialLuminescent ProteinsMicroscopy, FluorescenceRNA, MessengerSingle-Cell AnalysisStress, PhysiologicalTime-Lapse ImagingAnti-Bacterial AgentsAntitoxinsBacterial ToxinsDNA-Binding ProteinsEndoribonucleasesEscherichia coli ProteinsLuminescent ProteinsMazE protein, E coliMazF protein, E coliRNA, Messenger

Identifiers

PMID29432616
PMCPMC5888573
OpenAlexW2794233849

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.