Evidence map›Paper›PMID 29431731›Full record

ArticleThe Journal of clinical investigation2018

Physiological genomics identifies genetic modifiers of long QT syndrome type 2 severity.

Sam Chai, Xiaoping Wan, Angelina Ramirez-Navarro, Paul J Tesar, Elizabeth S Kaufman, Eckhard Ficker, Alfred L George, Isabelle Deschênes

Open access · bronzeAbstract readCase Reports
In one paragraph

Article in The Journal of clinical investigation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 68 citations in OpenAlex.

  1. The diabetes-associated KDiabetologia · 2026
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  2. Cardiac Manifestations ofHealth science reports · 2026
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  3. Review
  4. Structure-Function Relationships of KAdvances in experimental medicine and biology · 2026
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  5. Article
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  7. Review
  8. Article
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  11. Review
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  13. Article
  14. Review
  15. Genome Editing and Inherited Cardiac Arrhythmias.Advances in experimental medicine and biology · 2023
    Article
  16. Article
  17. Article
  18. Uncovering the Genetic Etiology of the (Posttherapy) Broken Heart.Journal of the National Cancer Institute · 2022
    Article
  19. Mutation-Specific Differences in Kv7.1 (International journal of molecular sciences · 2022
    Review
  20. How Functional Genomics Can Keep Pace With VUS Identification.Frontiers in cardiovascular medicine · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Sam ChaiDepartment of Physiology and Biophysics.
Xiaoping WanHeart and Vascular Research Center, Department of Medicine, and.
Angelina Ramirez-NavarroHeart and Vascular Research Center, Department of Medicine, and.
Paul J TesarDepartment of Genetics, Case Western Reserve University, Cleveland, Ohio, USA.
Elizabeth S KaufmanHeart and Vascular Research Center, Department of Medicine, and.
Eckhard FickerHeart and Vascular Research Center, Department of Medicine, and.
Alfred L GeorgeDepartment of Pharmacology, Northwestern University, Chicago, Illinois, USA.
Isabelle DeschênesDepartment of Physiology and Biophysics.
Case Western Reserve University · USNorthwestern University · US

Funding

Clinical and Translational Science Collaborative of ClevelandUL1TR000439 · NCATS · CASE WESTERN RESERVE UNIVERSITY · PI KONSTAN, MICHAEL W. · 2012 to 2016
$50.0M
Genotype-Phenotype Discordance in Long QT SyndromeR01HL124245 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI DESCHENES, ISABELLE · 2014 to 2017
$2.2M
Cardiovascular Research Training Program (CRTP)T32HL105338 · NHLBI · CASE WESTERN RESERVE UNIVERSITY · PI JAIN, MUKESH KUMAR · 2010 to 2014
$1.8M
NCATS NIH HHS UL1 TR000439NHLBI NIH HHS R01 HL124245NHLBI NIH HHS T32 HL105338
6 · The paper itself

Abstract

Congenital long QT syndrome (LQTS) is an inherited channelopathy associated with life-threatening arrhythmias. LQTS type 2 (LQT2) is caused by mutations in KCNH2, which encodes the potassium channel hERG. We hypothesized that modifier genes are partly responsible for the variable phenotype severity observed in some LQT2 families. Here, we identified contributors to variable expressivity in an LQT2 family by using induced pluripotent stem cell-derived cardiomyocytes (iPSC-CMs) and whole exome sequencing in a synergistic manner. We found that iPSC-CMs recapitulated the clinical genotype-phenotype discordance in vitro. Importantly, iPSC-CMs derived from the severely affected LQT2 patients displayed prolonged action potentials compared with cells from mildly affected first-degree relatives. The iPSC-CMs derived from all patients with hERG R752W mutation displayed lower IKr amplitude. Interestingly, iPSC-CMs from severely affected mutation-positive individuals exhibited greater L-type Ca2+ current. Whole exome sequencing identified variants of KCNK17 and the GTP-binding protein REM2, providing biologically plausible explanations for this variable expressivity. Genome editing to correct a REM2 variant reversed the enhanced L-type Ca2+ current and prolonged action potential observed in iPSC-CMs from severely affected individuals. Thus, our findings showcase the power of combining complementary physiological and genomic analyses to identify genetic modifiers and potential therapeutic targets of a monogenic disorder. Furthermore, we propose that this strategy can be deployed to unravel myriad confounding pathologies displaying variable expressivity.

Indexed as

MutationAction PotentialsAdolescentAdultAnimalsArrhythmias, CardiacCalciumCHO CellsCricetinaeCricetulusExomeFamily HealthFemaleGenes, ModifierGenetic Association StudiesGenomeCalciumKCNK17 protein, humanMonomeric GTP-Binding ProteinsPotassium Channels, Tandem Pore DomainREM2 protein, humanArrhythmiasCardiologyGeneticsIon channelsiPS cells

Identifiers

PMID29431731
PMCPMC5824853
OpenAlexW2786935673

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.