Evidence map›Paper›PMID 29426894›Full record

ArticleScientific reports2018

Site-specific N-glycosylation analysis of soluble Fcγ receptor IIIb in human serum.

Hirokazu Yagi, Daisuke Takakura, Lubka T Roumenina, Wolf Herman Fridman, Catherine Sautès-Fridman, Nana Kawasaki, Koichi Kato

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  15. CD16a with oligomannose-typeThe Journal of biological chemistry · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hirokazu YagiFaculty and Graduate School of Pharmaceutical Sciences, Nagoya City University, 3-1 Tanabe-dori, Mizuho-ku, Nagoya, 467-8603, Japan.
Daisuke TakakuraDepartment of Medical Life Science, Graduate School of Medical Life Science, Yokohama City University, Suehiro-cho 1-7-29, Tsurumi-ku, Yokohama, 230-0045, Japan.
Lubka T RoumeninaUMRS1138, Université Paris Descartes, Université Pierre et Marie Curie, 15, rue de l'Ecole-de-Médecine, 75270, Paris, France.ORCID 0000-0002-9940-0324
Wolf Herman FridmanUMRS1138, Université Paris Descartes, Université Pierre et Marie Curie, 15, rue de l'Ecole-de-Médecine, 75270, Paris, France.
Catherine Sautès-FridmanUMRS1138, Université Paris Descartes, Université Pierre et Marie Curie, 15, rue de l'Ecole-de-Médecine, 75270, Paris, France.ORCID 0000-0003-1735-8722
Nana KawasakiDepartment of Medical Life Science, Graduate School of Medical Life Science, Yokohama City University, Suehiro-cho 1-7-29, Tsurumi-ku, Yokohama, 230-0045, Japan. nana@yokohama-cu.ac.jp.
Koichi KatoFaculty and Graduate School of Pharmaceutical Sciences, Nagoya City University, 3-1 Tanabe-dori, Mizuho-ku, Nagoya, 467-8603, Japan. kkato@phar.nagoya-cu.ac.jp.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fc-receptors for immunoglobulin G (FcγRs) mediate a variety of effector and regulatory mechanisms in the immune system. N-glycosylation of FcγRs critically affects their functions which is well exemplified by antibody-dependent cell-mediated cytotoxicity (ADCC) and phagocytosis mediated by homologous FcγRIIIa and FcγRIIIb, respectively. Although several reports describe N-glycosylation profiles of recombinant FcγRIII glycoproteins, much remains unknown regarding their native glycoforms. Here we performed site-specific N-glycosylation profiling of a soluble form of FcγRIIIb purified from human serum based on mass spectrometric analysis. Our data indicate a distinct and common tendency of the glycoforms exhibited at each N-glycosylation site between the native and the previously reported recombinant FcγRIII glycoproteins. Among the six N-glycosylation sites of serum soluble FcγRIIIb, Asn45 was shown to be exclusively occupied by high-mannose-type oligosaccharides, whereas the remaining sites were solely modified by the complex-type oligosaccharides with sialic acid and fucose residues. The results of our endogenous FcγRIII glycoform analyses are important for the optimization of therapeutic antibody efficacy.

Indexed as

Protein Processing, Post-TranslationalAmino Acid SequenceGlycopeptidesGlycosylationGPI-Linked ProteinsHumansMass SpectrometryReceptors, IgGSequence HomologyFCGR3B protein, humanGlycopeptidesGPI-Linked ProteinsReceptors, IgG

Identifiers

PMID29426894
PMCPMC5807427

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.