Evidence map›Paper›PMID 29425690›Full record

ReviewFree radical biology & medicine2018

Light-induced oxidant production by fluorescent proteins.

Adam J Trewin, Brandon J Berry, Alicia Y Wei, Laura L Bahr, Thomas H Foster, Andrew P Wojtovich

Abstract readReview
In one paragraph

Review in Free radical biology & medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Studying Chromatin Epigenetics with Fluorescence Microscopy.International journal of molecular sciences · 2022
    Review
  11. Optogenetics at the presynapse.Nature neuroscience · 2022
    Review
  12. Review
  13. Control of actin polymerizationFrontiers in cell and developmental biology · 2022
    Review
  14. Article
  15. Review
  16. Molecular biology of the cell · 2021
    Article
  17. Review
  18. Photophysics of a protein-bound derivative of malachite green that sensitizes the production of singlet oxygen.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2021
    Article
  19. Optical manipulation of molecular function by chromophore-assisted light inactivation.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2021
    Review
  20. Neuronal AMPK coordinates mitochondrial energy sensing and hypoxia resistance in C. elegans.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Adam J TrewinUniversity of Rochester Medical Center, Department of Anesthesiology and Perioperative Medicine, Rochester 14642, United States.
Brandon J BerryUniversity of Rochester Medical Center, Department of Pharmacology and Physiology, Rochester 14642, United States.
Alicia Y WeiUniversity of Rochester Medical Center, Department of Anesthesiology and Perioperative Medicine, Rochester 14642, United States.
Laura L BahrUniversity of Rochester Medical Center, Department of Anesthesiology and Perioperative Medicine, Rochester 14642, United States.
Thomas H FosterUniversity of Rochester Medical Center, Department of Imaging Sciences, Rochester 14642, United States.
Andrew P WojtovichUniversity of Rochester Medical Center, Department of Anesthesiology and Perioperative Medicine, Rochester 14642, United States; University of Rochester Medical Center, Department of Pharmacology and Physiology, Rochester 14642, United States. Electronic address: Andrew_Wojtovich@urmc.rochester.edu.
University of Rochester Medical Center · US

Funding

Training in Cellular, Biochemical and Molecular SciencesT32GM068411 · NIGMS · UNIVERSITY OF ROCHESTER · PI MAQUAT, LYNNE E · 2005 to 2019
$3.9M
Mitochondrial ROS Microdomains and Neuronal IschemiaR01NS092558 · NINDS · UNIVERSITY OF ROCHESTER · PI WOJTOVICH, ANDREW PHILLIP · 2015 to 2025
$3.7M
NIGMS NIH HHS T32 GM068411NINDS NIH HHS R01 NS092558
6 · The paper itself

Abstract

Oxidants play an important role in the cell and are involved in many redox processes. Oxidant concentrations are maintained through coordinated production and removal systems. The dysregulation of oxidant homeostasis is a hallmark of many disease pathologies. The local oxidant microdomain is crucial for the initiation of many redox signaling events; however, methods to control oxidant product are limited. Some fluorescent proteins, including GFP, TagRFP, KillerRed, miniSOG, and their derivatives, generate oxidants in response to light. These genetically-encoded photosensitizers produce singlet oxygen and superoxide upon illumination and offer spatial and temporal control over oxidant production. In this review, we will examine the photosensitization properties of fluorescent proteins and their application to redox biology. Emerging concepts of selective oxidant species production via photosensitization and the impact of light on biological systems are discussed.

Indexed as

LightAnimalsHumansLuminescent ProteinsOxidantsSinglet OxygenLuminescent ProteinsOxidantsSinglet OxygenKillerRedminiSOGOptogeneticsPhotosensitizationPhotosensitizerReactive oxygen speciesSinglet oxygenSuperNovaSuperoxide

Identifiers

PMID29425690
PMCPMC6078816
OpenAlexW2792995290

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.