Evidence map›Paper›PMID 29423657›Full record

ArticleMolecular genetics and genomics : MGG2018

QTL delineation for five fiber quality traits based on an intra-specific Gossypium hirsutum L. recombinant inbred line population.

Xiaoyun Jia, Hantao Wang, Chaoyou Pang, Qifeng Ma, Junji Su, Hengling Wei, Meizhen Song, Shuli Fan, Shuxun Yu

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Article in Molecular genetics and genomics : MGG, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Xiaoyun JiaState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, China.
Hantao WangState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, China.
Chaoyou PangState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, China.
Qifeng MaState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, China.
Junji SuState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, China.
Hengling WeiState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, China.
Meizhen SongState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, China.
Shuli FanState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, China.
Shuxun YuState Key Laboratory of Cotton Biology, Institute of Cotton Research of CAAS, Anyang, 455000, China. ysx195311@163.com.
Cotton Research Institute · CNState Key Laboratory of Cotton Biology

Funding

Major Program of the National Natural Science Foundation of China 31690093
6 · The paper itself

Abstract

Gossypium hirsutum L. is the most important fiber crop worldwide and contributes to more than 95% of global cotton production. Marker-assisted selection (MAS) is an effective approach for improving fiber quality, and quantitative trait loci (QTL) mapping of fiber quality traits is important for cotton breeding. In this study, a permanent intra-specific recombinant inbred line (RIL) population containing 137 families was used for fiber quality testing. Based on a previously reported high-density genetic map with an average marker distance of 0.63 cM, 186 additive QTLs were obtained for five fiber quality traits over five consecutive years, including 39 for fiber length (FL), 36 for fiber strength (FS), 50 for fiber uniformity (FU), 33 for micronaire (MC) and 28 for fiber elongation (FE). Three stable QTLs, qMC-A4-1, qMC-D2-3 and qFS-D9-1, were detected in four datasets, and another eight stable QTLs, qMC-A4-2, qMC-D11-2, qFU-A9-1, qFU-A10-4, qFS-D11-1, qFL-D9-2, qFL-D11-1 and qFE-A3-2, were detected in three datasets. The annotated genes in these 11 stable QTLs were collected, and these genes included many transcription factors with functions during fiber development. 33 QTL coincidence regions were found, and these involved nearly half of the total QTLs. Four chromosome regions containing at least 6 QTLs were promising for fine mapping. In addition, 41 pairs of epistatic QTLs (e-QTLs) were screened, including 6 for FL, 30 for FS, 2 for FU and 3 for MC. The identification of stable QTLs adds valuable information for further QTL fine mapping and gene positional cloning for fiber quality genetic detection and provides useful markers for further molecular breeding in enhancing fiber quality.

Indexed as

Chromosome MappingCotton FiberInbreedingQuantitative Trait LociGossypiumEpistatic QTLFiber quality traitsGossypium hirsutum L.QTL coincidencesQuantitative trait loci

Identifiers

PMID29423657
OpenAlexW2794243987

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.