Evidence map›Paper›PMID 29423234›Full record

ArticleHorticulture research2018

Reference quality assembly of the 3.5-Gb genome of

Amanda M Hulse-Kemp, Shamoni Maheshwari, Kevin Stoffel, Theresa A Hill, David Jaffe, Stephen R Williams, Neil Weisenfeld, Srividya Ramakrishnan, Vijay Kumar, Preyas Shah and 3 more

Open access · goldAbstract read
In one paragraph

Article in Horticulture research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed
28.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 158 citations in OpenAlex.

  1. Review
  2. Genome-Wide Identification of LCY Genes inPlants (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Article
  5. Genome assemblies of IndianNAR genomics and bioinformatics · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Pangenomic and Phenotypic Characterization of ColombianInternational journal of molecular sciences · 2025
    Article
  10. Article
  11. Identification ofAntioxidants (Basel, Switzerland) · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. The Bioinformatic Applications of Hi-C and Linked Reads.Genomics, proteomics & bioinformatics · 2024
    Review
  17. Genomic selection for crop improvement in fruits and vegetables: a systematic scoping review.Molecular breeding : new strategies in plant improvement · 2024
    Article
  18. Article
  19. Article
  20. Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Amanda M Hulse-Kemp1Department of Plant Sciences, University of California, Davis, CA USA.
Shamoni Maheshwari1Department of Plant Sciences, University of California, Davis, CA USA.
Kevin Stoffel1Department of Plant Sciences, University of California, Davis, CA USA.
Theresa A Hill1Department of Plant Sciences, University of California, Davis, CA USA.
David Jaffe10x Genomics, Inc, 7068 Koll Center Parkway, Suite 401, Pleasanton, CA USA.
Stephen R Williams10x Genomics, Inc, 7068 Koll Center Parkway, Suite 401, Pleasanton, CA USA.
Neil Weisenfeld10x Genomics, Inc, 7068 Koll Center Parkway, Suite 401, Pleasanton, CA USA.
Srividya Ramakrishnan5Department of Computer Science, Johns Hopkins University, Baltimore, MD USA.
Vijay Kumar10x Genomics, Inc, 7068 Koll Center Parkway, Suite 401, Pleasanton, CA USA.
Preyas Shah10x Genomics, Inc, 7068 Koll Center Parkway, Suite 401, Pleasanton, CA USA.
Michael C Schatz5Department of Computer Science, Johns Hopkins University, Baltimore, MD USA.
Deanna M Church10x Genomics, Inc, 7068 Koll Center Parkway, Suite 401, Pleasanton, CA USA.
Allen Van Deynze1Department of Plant Sciences, University of California, Davis, CA USA.
10X Genomics (United States) · USUniversity of California, Davis · USJohns Hopkins University · USNorth Carolina State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Linked-Read sequencing technology has recently been employed successfully for

Identifiers

PMID29423234
PMCPMC5798813
OpenAlexW2951072433

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.