Evidence map›Paper›PMID 29416801›Full record

ArticleOncotarget2018

Metabolomic alterations in invasive ductal carcinoma of breast: A comprehensive metabolomic study using tissue and serum samples.

Tushar H More, Sourav RoyChoudhury, Joel Christie, Khushman Taunk, Anupama Mane, Manas K Santra, Koel Chaudhury, Srikanth Rapole

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 69 citations in OpenAlex.

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  17. MR spectroscopy in breast cancer metabolomics.Analytical science advances · 2021
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  19. Successive High-Resolution (HAnalytical chemistry · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Tushar H MoreProteomics Lab, National Center for Cell Science, Ganeshkhind, Pune 411007, MH, India.
Sourav RoyChoudhurySchool of Medical Science and Technology, Indian Institute of Technology, Kharagpur 721302, WB, India.
Joel ChristieProteomics Lab, National Center for Cell Science, Ganeshkhind, Pune 411007, MH, India.
Khushman TaunkProteomics Lab, National Center for Cell Science, Ganeshkhind, Pune 411007, MH, India.
Anupama ManeGrant Medical Foundation, Ruby Hall Clinic, Pune 411001, MH, India.
Manas K SantraCancer Biology and Epigenetics Lab, National Center for Cell Science, Ganeshkhind, Pune 411007, MH, India.
Koel ChaudhurySchool of Medical Science and Technology, Indian Institute of Technology, Kharagpur 721302, WB, India.
Srikanth RapoleProteomics Lab, National Center for Cell Science, Ganeshkhind, Pune 411007, MH, India.
National Centre for Cell Science · INIndian Institute of Technology Kharagpur · INRuby Hall Clinic · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Invasive ductal carcinoma (IDC) is the most common type of breast cancer and the leading cause of breast cancer related mortality. In the present study, metabolomic profiles of 72 tissue samples and 146 serum samples were analysed using targeted liquid chromatography multiple reaction monitoring mass spectrometry (LC-MRM/MS) and untargeted gas chromatography mass spectrometry (GC-MS) approaches. Combination of univariate and multivariate statistical treatment identified significant alterations of 42 and 32 metabolites in tissue and serum samples of IDC, respectively when compared to control. Some of the metabolite changes from tissue were also reflected in serum, indicating a bi-directional interaction of metabolites in IDC. Additionally, 8 tissue metabolites and 9 serum metabolites showed progressive change from control to benign to IDC suggesting their possible role in malignant transformation. We have identified a panel of three metabolites viz. tryptophan, tyrosine, and creatine in tissue and serum, which could be useful in screening of IDC subjects from both control and benign. The metabolomic alterations in IDC showed perturbations in purine and pyrimidine metabolism, amino sugar metabolism, amino acid metabolism, fatty acid biosynthesis etc. Comprehensively, this study provides valuable insights into metabolic adaptations of IDC, which can help to identify diagnostic markers as well as potential therapeutic targets.

Indexed as

Invasive ductal carcinomaserumtargeted metabolomicstissueuntargeted metabolomics

Identifiers

PMID29416801
PMCPMC5788669
OpenAlexW2780054069

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.