Evidence map›Paper›PMID 29416609›Full record

ArticleOncotarget2018

Alcohol and hepatitis virus-dysregulated lncRNAs as potential biomarkers for hepatocellular carcinoma.

Hao Zheng, Pinxue Li, James G Kwok, Avinaash Korrapati, Wei Tse Li, Yuanhao Qu, Xiao Qi Wang, Tatiana Kisseleva, Jessica Wang-Rodriguez, Weg M Ongkeko

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. LncRNAs in HCV Infection and HCV-Related Liver Disease.International journal of molecular sciences · 2020
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Clinical Significance of Serum lncRNA Cancer Susceptibility Candidate 2 (CASC2) for Chronic Renal Failure in Patients with Type 2 Diabetes.Medical science monitor : international medical journal of experimental and clinical research · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 2 countries.

Hao ZhengDepartment of Surgery, University of California, San Diego, La Jolla, California, USA.
Pinxue LiDepartment of Surgery, University of California, San Diego, La Jolla, California, USA.
James G KwokDepartment of Surgery, University of California, San Diego, La Jolla, California, USA.
Avinaash KorrapatiDepartment of Surgery, University of California, San Diego, La Jolla, California, USA.
Wei Tse LiDepartment of Surgery, University of California, San Diego, La Jolla, California, USA.
Yuanhao QuDepartment of Surgery, University of California, San Diego, La Jolla, California, USA.
Xiao Qi WangDepartment of Surgery, The University of Hong Kong, Pokfulam, Hong Kong, China.
Tatiana KisselevaDepartment of Surgery, University of California, San Diego, La Jolla, California, USA.
Jessica Wang-RodriguezVeterans Administration Medical Center and Department of Pathology, University of California, San Diego, La Jolla, California, USA.
Weg M OngkekoDepartment of Surgery, University of California, San Diego, La Jolla, California, USA.
University of California, San Diego · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatocellular carcinoma (HCC) is one of the leading causes of cancer-related deaths because of frequent late detection and poor therapeutic outcomes, necessitating the need to identify effective biomarkers for early diagnosis and new therapeutic targets for effective treatment. Long noncoding RNAs (lncRNAs) have emerged as promising molecular markers for diagnosis and treatment. Through analysis of patient samples from The Cancer Genome Atlas database, we identified putative lncRNAs dysregulated in HCC and by its risk factors, hepatitis infection and alcohol consumption. We identified 184 lncRNAs dysregulated in HCC tumors versus paired normal samples, 53 lncRNAs dysregulated in alcohol-drinking patients with hepatitis B, and 5, 456 lncRNAs dysregulated in patients with hepatitis infection. A panel of these candidate lncRNAs' expressions correlated significantly with patient survival, clinical variables, and known genomic alteration in HCC. Two most significantly dysregulated lncRNAs in our computational analysis, lnc-CFP-1:1 and lnc-CD164L2-1:1, were validated

Indexed as

alcoholhepatitishepatocellular carcinomalncRNA

Identifiers

PMID29416609
PMCPMC5787460
OpenAlexW2771777560

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.