Evidence map›Paper›PMID 29412786›Full record

ArticleEpigenetics2017

MeCP2 interacts with chromosomal microRNAs in brain.

Abdul Waheed Khan, Mark Ziemann, Haloom Rafehi, Scott Maxwell, Giuseppe D Ciccotosto, Assam El-Osta

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Abdul Waheed Khana Central Clinical School, Faculty of Medicine , Monash University , Victoria , Australia.
Mark Ziemanna Central Clinical School, Faculty of Medicine , Monash University , Victoria , Australia.
Haloom Rafehia Central Clinical School, Faculty of Medicine , Monash University , Victoria , Australia.
Scott Maxwella Central Clinical School, Faculty of Medicine , Monash University , Victoria , Australia.
Giuseppe D Ciccotostoc Department of Pathology , The University of Melbourne , Parkville , Victoria , Australia.
Assam El-Ostaa Central Clinical School, Faculty of Medicine , Monash University , Victoria , Australia.
Baker Heart and Diabetes Institute · AUThe University of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although methyl CpG binding domain protein-2 (MeCP2) is commonly understood to function as a silencing factor at methylated DNA sequences, recent studies also show that MeCP2 can bind unmethylated sequences and coordinate gene activation. MeCP2 displays broad binding patterns throughout the genome, with high expression levels similar to histone H1 in neurons. Despite its significant presence in the brain, only subtle gene expression changes occur in the absence of MeCP2. This may reflect a more complex regulatory mechanism of MeCP2 to complement chromatin binding. Using an RNA immunoprecipitation of native chromatin technique, we identify MeCP2 interacting microRNAs in mouse primary cortical neurons. In addition, comparison with mRNA sequencing data from Mecp2-null mice suggests that differentially expressed genes may indeed be targeted by MeCP2-interacting microRNAs. These findings highlight the MeCP2 interaction with microRNAs that may modulate its binding with chromatin and regulate gene expression.

Indexed as

AnimalsBrainCells, CulturedMethyl-CpG-Binding Protein 2MiceMice, Inbred C57BLMicroRNAsNeuronsProtein BindingMecp2 protein, mouseMethyl-CpG-Binding Protein 2MicroRNAsMeCP2microRNAsRNA-chromatin immunoprecipitation

Identifiers

PMID29412786
PMCPMC5810764
OpenAlexW2790362296

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.