Evidence map›Paper›PMID 29412137›Full record

ArticleeLife2018

Salient experiences are represented by unique transcriptional signatures in the mouse brain.

Diptendu Mukherjee, Bogna Marta Ignatowska-Jankowska, Eyal Itskovits, Ben Jerry Gonzales, Hagit Turm, Liz Izakson, Doron Haritan, Noa Bleistein, Chen Cohen, Ido Amit and 4 more

Abstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

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  14. The mouse brain after foot shock in four dimensions: Temporal dynamics at a single-cell resolution.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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  19. Behavior-related gene regulatory networks: A new level of organization in the brain.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Review
  20. The role of the genome in experience-dependent plasticity: Extending the analogy of the genomic action potential.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Diptendu MukherjeeDepartment of Biological Chemistry, Silberman Institute of Life Sciences, The Hebrew University, Jerusalem, Israel.
Bogna Marta Ignatowska-JankowskaThe Edmond and Lily Safra Center for Brain Sciences, The Hebrew University, Jerusalem, Israel.ORCID http://orcid.org/0000-0002-8427-1128
Eyal ItskovitsDepartment of Genetics, Silberman Institute of Life Sciences, The Hebrew University, Jerusalem, Israel.
Ben Jerry GonzalesDepartment of Biological Chemistry, Silberman Institute of Life Sciences, The Hebrew University, Jerusalem, Israel.
Hagit TurmDepartment of Biological Chemistry, Silberman Institute of Life Sciences, The Hebrew University, Jerusalem, Israel.
Liz IzaksonDepartment of Biological Chemistry, Silberman Institute of Life Sciences, The Hebrew University, Jerusalem, Israel.
Doron HaritanDepartment of Biological Chemistry, Silberman Institute of Life Sciences, The Hebrew University, Jerusalem, Israel.
Noa BleisteinDepartment of Biological Chemistry, Silberman Institute of Life Sciences, The Hebrew University, Jerusalem, Israel.
Chen CohenDepartment of Biological Chemistry, Silberman Institute of Life Sciences, The Hebrew University, Jerusalem, Israel.
Ido AmitDepartment of Immunology, Weizmann Institute of Science, Rehovot, Israel.
Tal ShayDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer-Sheva, Israel.
Brad GrueterDepartment of Psychiatry, Vanderbilt University School of Medicine, Nashville, United States.ORCID http://orcid.org/0000-0002-4224-3866
Alon ZaslaverDepartment of Genetics, Silberman Institute of Life Sciences, The Hebrew University, Jerusalem, Israel.
Ami CitriDepartment of Biological Chemistry, Silberman Institute of Life Sciences, The Hebrew University, Jerusalem, Israel.ORCID http://orcid.org/0000-0002-9914-0278

Funding

Marie Curie PCIG13-GA-2013-61820
6 · The paper itself

Abstract

It is well established that inducible transcription is essential for the consolidation of salient experiences into long-term memory. However, whether inducible transcription relays information about the identity and affective attributes of the experience being encoded, has not been explored. To this end, we analyzed transcription induced by a variety of rewarding and aversive experiences, across multiple brain regions. Our results describe the existence of robust transcriptional signatures uniquely representing distinct experiences, enabling near-perfect decoding of recent experiences. Furthermore, experiences with shared attributes display commonalities in their transcriptional signatures, exemplified in the representation of valence, habituation and reinforcement. This study introduces the concept of a neural transcriptional code, which represents the encoding of experiences in the mouse brain. This code is comprised of distinct transcriptional signatures that correlate to attributes of the experiences that are being committed to long-term memory.

Indexed as

Memory, Long-TermTranscriptional ActivationTranscription, GeneticAnimalsBehavior, AnimalBrainGene Expression ProfilingMice, Inbred C57BLMicroarray AnalysisReal-Time Polymerase Chain Reactionexperience-dependent plasticityimmediate-early genesinducible transcriptionlimbic systemmouseneuroscienceprospective codingvalence

Identifiers

PMID29412137
PMCPMC5862526

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.