Evidence map›Paper›PMID 29410458›Full record

ArticleScientific reports2018

Heme interaction of the intrinsically disordered N-terminal peptide segment of human cystathionine-β-synthase.

Amit Kumar, Amelie Wißbrock, Nishit Goradia, Peter Bellstedt, Ramadurai Ramachandran, Diana Imhof, Oliver Ohlenschläger

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. The coralScience advances · 2022
    Article
  4. Regulation of protein function and degradation by heme, heme responsive motifs, and CO.Critical reviews in biochemistry and molecular biology · 2022
    Review
  5. Structural Basis for Allostery in PLP-dependent Enzymes.Frontiers in molecular biosciences · 2022
    Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. Hydrogen Sulfide Metabolism and Signaling in the Tumor Microenvironment.Advances in experimental medicine and biology · 2020
    Review
  11. Article
  12. Article
  13. Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Amit KumarLeibniz Institute on Aging - Fritz Lipmann Institute, Beutenbergstr. 11, D-07745, Jena, Germany.
Amelie WißbrockPharmaceutical Biochemistry and Bioanalytics, Pharmaceutical Institute, University of Bonn, An der Immenburg 4, D-53121, Bonn, Germany.
Nishit GoradiaLeibniz Institute on Aging - Fritz Lipmann Institute, Beutenbergstr. 11, D-07745, Jena, Germany.
Peter BellstedtFriedrich Schiller University, Faculty of Chemistry and Earth Sciences, Humboldtstr. 10, D-07743, Jena, Germany.ORCID http://orcid.org/0000-0002-5131-8452
Ramadurai RamachandranLeibniz Institute on Aging - Fritz Lipmann Institute, Beutenbergstr. 11, D-07745, Jena, Germany.
Diana ImhofPharmaceutical Biochemistry and Bioanalytics, Pharmaceutical Institute, University of Bonn, An der Immenburg 4, D-53121, Bonn, Germany. dimhof@uni-bonn.de.ORCID http://orcid.org/0000-0003-4163-7334
Oliver OhlenschlägerLeibniz Institute on Aging - Fritz Lipmann Institute, Beutenbergstr. 11, D-07745, Jena, Germany. oliver.ohlenschlaeger@leibniz-fli.de.
Leibniz Institute on Aging - Fritz Lipmann Institute (FLI) · DEUniversity of Bonn · DEFriedrich Schiller University Jena · DELeibniz Association · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cystathionine-β-synthase (CBS) belongs to a large family of pyridoxal 5'-phosphate (PLP)-dependent enzymes, responsible for the sulfur metabolism. The heme-dependent protein CBS is part of regulatory pathways also involving the gasotransmitter hydrogen sulfide. Malfunction of CBS can lead to pathologic conditions like cancer, cardiovascular and neurodegenerative disorders. Truncation of residues 1-40, absent in X-ray structures of CBS, reduces but does not abolish the activity of the enzyme. Here we report the NMR resonance assignment and heme interaction studies for the N-terminal peptide stretch of CBS. We present NMR-spectral evidence that residues 1-40 constitute an intrinsically disordered region in CBS and interact with heme via a cysteine-proline based motif.

Indexed as

Amino Acid SequenceAnimalsBacterial ProteinsBinding SitesCloning, MolecularCystathionine beta-SynthaseEscherichia coliGene ExpressionGenetic VectorsHemeHumansIntrinsically Disordered ProteinsKineticsNuclear Magnetic Resonance, BiomolecularPeptidesProtein BindingBacterial ProteinsCystathionine beta-SynthaseHemeIgG Fc-binding protein, StreptococcusIntrinsically Disordered ProteinsPeptidesPyridoxal PhosphateRecombinant Fusion Proteins

Identifiers

PMID29410458
PMCPMC5802807
OpenAlexW2806886957

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.