Evidence map›Paper›PMID 29410419›Full record

ArticleScientific reports2018

Methane utilization in Methylomicrobium alcaliphilum 20Z

Ilya R Akberdin, Merlin Thompson, Richard Hamilton, Nalini Desai, Danny Alexander, Calvin A Henard, Michael T Guarnieri, Marina G Kalyuzhnaya

Erratum issuedAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 48 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  19. A methanotrophic bacterium to enable methane removal for climate mitigation.Proceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Ilya R AkberdinBiology Department and Viral Information Institute, San Diego State University, San Diego, USA.
Merlin ThompsonBiology Department and Viral Information Institute, San Diego State University, San Diego, USA.
Richard HamiltonBiology Department and Viral Information Institute, San Diego State University, San Diego, USA.
Nalini DesaiMetabolon, Inc. 617 Davis Drive, Suite 400, Durham, NC, 27713, USA.
Danny AlexanderMetabolon, Inc. 617 Davis Drive, Suite 400, Durham, NC, 27713, USA.
Calvin A HenardNational Bioenergy Center, National Renewable Energy Laboratory, 15013 Denver West Parkway, MS 3323, Golden, CO, 80401, United States.
Michael T GuarnieriNational Bioenergy Center, National Renewable Energy Laboratory, 15013 Denver West Parkway, MS 3323, Golden, CO, 80401, United States.
Marina G KalyuzhnayaBiology Department and Viral Information Institute, San Diego State University, San Diego, USA. mkalyuzhnaya@mail.sdsu.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biological methane utilization, one of the main sinks of the greenhouse gas in nature, represents an attractive platform for production of fuels and value-added chemicals. Despite the progress made in our understanding of the individual parts of methane utilization, our knowledge of how the whole-cell metabolic network is organized and coordinated is limited. Attractive growth and methane-conversion rates, a complete and expert-annotated genome sequence, as well as large enzymatic,

Indexed as

Acetyl Coenzyme ACitric Acid CycleComputer SimulationMetabolic Networks and PathwaysMetabolomeMethaneMethanolMethylococcaceaePentose Phosphate PathwayAcetyl Coenzyme AMethaneMethanol

Identifiers

PMID29410419
PMCPMC5802761

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.