Evidence map›Paper›PMID 29410341›Full record

ArticleBiology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation2018

Evaluation of a Machine Learning-Based Prognostic Model for Unrelated Hematopoietic Cell Transplantation Donor Selection.

Ljubomir Buturovic, Jason Shelton, Stephen R Spellman, Tao Wang, Lyssa Friedman, David Loftus, Lyndal Hesterberg, Todd Woodring, Katharina Fleischhauer, Katharine C Hsu and 3 more

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Artificial Intelligence Approaches in Hematopoietic Cell Transplantation: A Review of the Current Status and Future DirectionsTurkish journal of haematology : official journal of Turkish Society of Haematology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 3 countries.

Ljubomir ButurovicClinical Persona Inc., East Palo Alto, California. Electronic address: ljubomir@clinicalpersona.com.
Jason SheltonTelomere Diagnostics, Menlo Park, California.
Stephen R SpellmanCenter for International Blood and Marrow Transplant Research, Minneapolis, Minnesota.
Tao WangCenter for International Blood and Marrow Transplant Research, Medical College of Wisconsin, Milwaukee, Wisconsin; Division of Biostatistics, Medical College of Wisconsin, Milwaukee, Wisconsin.
Lyssa FriedmanTelomere Diagnostics, Menlo Park, California.
David LoftusTelomere Diagnostics, Menlo Park, California.
Lyndal HesterbergTelomere Diagnostics, Menlo Park, California.
Todd WoodringTelomere Diagnostics, Menlo Park, California.
Katharina FleischhauerInstitute for Experimental Cellular Therapy, University Hospital Essen, Germany.
Katharine C HsuMemorial Hospital Research Laboratories, Memorial Sloan Kettering Cancer Center, New York, New York.
Michael R VernerisChildren's blood and bone marrow diseases, Department of pediatrics, University of Colorado-Denver, Denver, Colorado.
Mike HaagensonCenter for International Blood and Marrow Transplant Research, Minneapolis, Minnesota.
Stephanie J LeeCenter for International Blood and Marrow Transplant Research, Minneapolis, Minnesota; Clinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington.
Menlo School · USEssen University Hospital · DEFred Hutch Cancer Center · USMedical College of Wisconsin · USMemorial Sloan Kettering Cancer Center · USPro Persona · NLUniversity of Denver · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Data Resource for Analyzing Blood &Marrow TransplantsU24CA076518 · NCI · MEDICAL COLLEGE OF WISCONSIN · PI Amy M Moskop, Bronwen Shaw · 1998 to 2026
$105.2M
Easy-to-read Informed Consent for HCT Clinical TrialsU10HL069294 · NHLBI · MEDICAL COLLEGE OF WISCONSIN · PI HOROWITZ, MARY MARESCA · 2011 to 2016
$43.8M
NCI NIH HHS P30 CA008748NCI NIH HHS U24 CA076518NHLBI NIH HHS U10 HL069294
6 · The paper itself

Abstract

The survival of patients undergoing hematopoietic cell transplantation (HCT) from unrelated donors for acute leukemia exhibits considerable variation, even after stringent genetic matching. To improve the donor selection process, we attempted to create an algorithm to quantify the likelihood of survival to 5 years after unrelated donor HCT for acute leukemia, based on the clinical characteristics of the donor selected. All standard clinical variables were included in the model, which also included average leukocyte telomere length of the donor based on its association with recipient survival in severe aplastic anemia, and links to multiple malignancies. We developed a multivariate classifier that assigned a Preferred or NotPreferred label to each prospective donor based on the survival of the recipient. In a previous analysis using a resampling method, recipients with donors labeled Preferred experienced clinically compelling better survival compared with those labeled NotPreferred by the test. However, in a pivotal validation study in an independent cohort of 522 patients, the overall survival of the Preferred and NotPreferred donor groups was not significantly different. Although machine learning approaches have successfully modeled other biological phenomena and have led to accurate predictive models, our attempt to predict HCT outcomes after unrelated donor transplantation was not successful.

Indexed as

Machine LearningPrognosisAcute DiseaseAlgorithmsDonor SelectionHematopoietic Stem Cell TransplantationHumansLeukemiaPredictive Value of TestsSurvival RateUnrelated DonorsAcute leukemiaAllogeneic hematopoietic cell transplantationDonor selectionLeukocyte telomere lengthMachine learning

Identifiers

PMID29410341
PMCPMC5993610
OpenAlexW2787721928

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.