Evidence map›Paper›PMID 29409736›Full record

ReviewTrends in molecular medicine2018

Biosignature Discovery for Substance Use Disorders Using Statistical Learning.

James W Baurley, Christopher S McMahan, Carolyn M Ervin, Bens Pardamean, Andrew W Bergen

Abstract readReview
In one paragraph

Review in Trends in molecular medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Multiethnic Prediction of Nicotine Biomarkers and Association With Nicotine Dependence.Nicotine & tobacco research : official journal of the Society for Research on Nicotine and Tobacco · 2021
    Article
  4. Article
  5. Article
  6. Pharmacogenetics of alcohol use disorder treatments: an update.Expert opinion on drug metabolism & toxicology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

James W BaurleyBioRealm, Culver City, CA, USA; Bina Nusantara University, Jakarta, Indonesia. Electronic address: baurley@biorealm.ai.
Christopher S McMahanBina Nusantara University, Jakarta, Indonesia; Clemson University, Clemson, SC, USA.
Carolyn M ErvinBioRealm, Culver City, CA, USA.
Bens PardameanBioRealm, Culver City, CA, USA; Bina Nusantara University, Jakarta, Indonesia.
Andrew W BergenBioRealm, Culver City, CA, USA; Oregon Research Institute, Eugene, OR, USA.

Funding

Smokescreen Translational (TL) Analysis PlatformR44AA027675 · NIAAA · BIOREALM · PI BAURLEY, JAMES WILLIAM, BERGEN, ANDREW W · 2018 to 2020
$1.7M
Smokescreen Translational (TL) Analysis PlatformR43DA041211 · NIDA · BIOREALM · PI BAURLEY, JAMES WILLIAM, BERGEN, ANDREW W · 2016 to 2016
$150k
NIAAA NIH HHS R44 AA027675NIDA NIH HHS R43 DA041211
6 · The paper itself

Abstract

There are limited biomarkers for substance use disorders (SUDs). Traditional statistical approaches are identifying simple biomarkers in large samples, but clinical use cases are still being established. High-throughput clinical, imaging, and 'omic' technologies are generating data from SUD studies and may lead to more sophisticated and clinically useful models. However, analytic strategies suited for high-dimensional data are not regularly used. We review strategies for identifying biomarkers and biosignatures from high-dimensional data types. Focusing on penalized regression and Bayesian approaches, we address how to leverage evidence from existing studies and knowledge bases, using nicotine metabolism as an example. We posit that big data and machine learning approaches will considerably advance SUD biomarker discovery. However, translation to clinical practice, will require integrated scientific efforts.

Indexed as

Machine LearningModels, StatisticalBiomarkersBiomedical ResearchHumansSubstance-Related DisordersBiomarkersartificial intelligencebiomarkergenomicsmachine learningnicotine metabolismsubstance use disorders

Identifiers

PMID29409736
PMCPMC5836808

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.