Evidence map›Paper›PMID 29407179›Full record

ArticleAnalytical biochemistry2018

A liquid chromatography tandem mass spectroscopy approach for quantification of protein methylation stoichiometry.

Grace L Cooper, Carol J Huseby, Claire N Chandler, Jean-Christophe Cocuron, Ana P Alonso, Jeff Kuret

Abstract read
In one paragraph

Article in Analytical biochemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Quantification of Methylation and Phosphorylation Stoichiometry.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Grace L CooperDepartment of Biological Chemistry and Pharmacology, The Ohio State University, Columbus, OH, USA.
Carol J HusebyDepartment of Biological Chemistry and Pharmacology, The Ohio State University, Columbus, OH, USA.
Claire N ChandlerDepartment of Biological Chemistry and Pharmacology, The Ohio State University, Columbus, OH, USA.
Jean-Christophe CocuronBioDiscovery Institute, University of North Texas, Denton, TX, USA.
Ana P AlonsoBioDiscovery Institute, University of North Texas, Denton, TX, USA.
Jeff KuretDepartment of Biological Chemistry and Pharmacology, The Ohio State University, Columbus, OH, USA. Electronic address: kuret.3@osu.edu.

Funding

Structure and Genesis of tau AggregatesRF1AG054018 · NIA · OHIO STATE UNIVERSITY · PI KURET, JEFF · 2017 to 2022
$4.4M
Molecular Biophysics predoctoral training at The Ohio State UniversityT32GM118291 · NIGMS · OHIO STATE UNIVERSITY · PI BUNDSCHUH, RALF A, KURET, JEFF · 2017 to 2021
$720k
The tau code of Alzheimer's diseaseR21NS077441 · NINDS · OHIO STATE UNIVERSITY · PI KURET, JEFF, YANG, AUSTIN · 2012 to 2013
$427k
NIA NIH HHS RF1 AG054018NIGMS NIH HHS T32 GM118291NINDS NIH HHS R21 NS077441
6 · The paper itself

Abstract

Post-translational modifications are biologically important and wide-spread modulators of protein function. Although methods for detecting the presence of specific modifications are becoming established, approaches for quantifying their mol modification/mol protein stoichiometry are less well developed. Here we introduce a ratiometric, label-free, targeted liquid chromatography tandem mass spectroscopy-based method for estimating Lys and Arg methylation stoichiometry on post-translationally modified proteins. Methylated Lys and Arg were detected with limits of quantification at low fmol and with linearity extending from 20 to 5000 fmol. This level of sensitivity allowed estimation of methylation stoichiometry from microgram quantities of various proteins, including those derived from either recombinant or tissue sources. The method also disaggregated total methylation stoichiometry into its elementary mono-, di-, and tri-methylated residue components. In addition to being compatible with kinetic experiments of protein methylation, the approach will be especially useful for characterizing methylation states of proteins isolated from cells and tissues.

Indexed as

AnimalsArginineCattleChromatography, LiquidHumansLysineMethylationProteinsTandem Mass SpectrometryArginineLysineProteinsLabel-freeMass spectrometryPost-translational modificationProtein methylation

Identifiers

PMID29407179
PMCPMC5849526

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.