Evidence map›Paper›PMID 29406755›Full record

ArticleThe journal of physical chemistry. B2018

Structural Modulation of Human Amylin Protofilaments by Naturally Occurring Mutations.

Florentina Tofoleanu, Ye Yuan, Frank C Pickard, Bartłomiej Tywoniuk, Bernard R Brooks, Nicolae-Viorel Buchete

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Florentina TofoleanuLaboratory of Computational Biology, National Heart, Lung, and Blood Institute , National Institutes of Health , Bethesda , Maryland 20892 , United States.
Ye YuanInstitute for Discovery , University College Dublin , Belfield, Dublin 4 , Ireland.
Frank C PickardLaboratory of Computational Biology, National Heart, Lung, and Blood Institute , National Institutes of Health , Bethesda , Maryland 20892 , United States.ORCID 0000-0002-9608-3466
Bartłomiej TywoniukInstitute for Discovery , University College Dublin , Belfield, Dublin 4 , Ireland.
Bernard R BrooksLaboratory of Computational Biology, National Heart, Lung, and Blood Institute , National Institutes of Health , Bethesda , Maryland 20892 , United States.ORCID 0000-0002-3586-2730
Nicolae-Viorel BucheteInstitute for Discovery , University College Dublin , Belfield, Dublin 4 , Ireland.

Funding

Molecular Dynamics Simulations Of Biological MacromoleculesZIAHL001050 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI BROOKS, BERNARD R · 2009 to 2025
$12.9M
Intramural NIH HHS Z99 HL999999
6 · The paper itself

Abstract

Human islet amyloid polypeptide (hIAPP), also known as amylin, is a 37-amino-acid peptide, co-secreted with insulin, and widely found in fibril form in type-2 diabetes patients. By using all-atom molecular dynamics simulations, we study hIAPP fibril segments (i.e., fibrillar oligomers) formed with sequences of naturally occurring variants from cat, rat, and pig, presenting different aggregation propensities. We characterize the effect of mutations on the structural dynamics of solution-formed hIAPP fibril models built from solid-state NMR data. Results from this study are in agreement with experimental observations regarding their respective relative aggregation propensities. We analyze in detail the specific structural characteristics and infer mechanisms that modulate the conformational stability of amylin fibrils. Results provide a platform for further studies and the design of new drugs that could interfere with amylin aggregation and its cytotoxicity. One particular mutation, N31K, has fibril-destabilizing properties, and could potentially improve the solubility of therapeutic amylin analogs.

Indexed as

Amino Acid SequenceAnimalsCatsHumansIslet Amyloid PolypeptideMutagenesis, Site-DirectedNuclear Magnetic Resonance, BiomolecularPrincipal Component AnalysisProtein Structure, SecondaryRatsSequence AlignmentSolubilitySwineIslet Amyloid Polypeptide

Identifiers

PMID29406755
PMCPMC6428083

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.