Evidence map›Paper›PMID 29406701›Full record

ArticleJournal of the American Chemical Society2018

Palladium Oxidative Addition Complexes for Peptide and Protein Cross-linking.

Koji Kubota, Peng Dai, Bradley L Pentelute, Stephen L Buchwald

Open access · greenAbstract read
In one paragraph

Article in Journal of the American Chemical Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
6.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 122 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Not So Bioorthogonal Chemistry.Journal of the American Chemical Society · 2025
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Another side of side chains.Nature reviews. Chemistry · 2024
    Article
  10. Non-symmetric stapling of native peptides.Nature reviews. Chemistry · 2024
    Review
  11. Recent Advances in Bioorthogonal Ligation and Bioconjugation.Topics in current chemistry (Cham) · 2023
    Review
  12. Ultra-rapid Electrophilic Cysteine Arylation.Journal of the American Chemical Society · 2023
    Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Pd(II)-Mediated C-H Activation for Cysteine Bioconjugation.Chemistry (Weinheim an der Bergstrasse, Germany) · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Koji KubotaDepartment of Chemistry, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, United States.
Peng DaiDepartment of Chemistry, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, United States.ORCID 0000-0002-4581-3473
Bradley L PenteluteDepartment of Chemistry, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, United States.ORCID 0000-0002-7242-801X
Stephen L BuchwaldDepartment of Chemistry, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, United States.ORCID 0000-0003-3875-4775
Massachusetts Institute of Technology · US

Funding

Metal-Catalyzed Methods for Organic SynthesisR35GM122483 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI STEPHEN L BUCHWALD · 2017 to 2026
$11.4M
EARLY TRANSITION METAL CATALYSTS IN ORGANIC SYNTHESISR01GM046059 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BUCHWALD, STEPHEN L · 1992 to 2016
$5.4M
Cysteine ArylationR01GM110535 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI PENTELUTE, BRADLEY LETHER · 2014 to 2018
$1.5M
NIGMS NIH HHS R01 GM046059NIGMS NIH HHS R01 GM110535NIGMS NIH HHS R35 GM122483
6 · The paper itself

Abstract

A new method for cysteine-lysine cross-linking in peptides and proteins using palladium oxidative addition complexes is presented. First, a biarylphosphine-supported palladium reagent is used to transfer an aryl group bearing an O-phenyl carbamate substituent to a cysteine residue. Next, this carbamate undergoes chemoselective acyl substitution by a proximal lysine to form a cross-link. The linkage so formed is stable toward acid, base, oxygen, and external thiol nucleophiles. This method was applied to cross-link cysteine with nearby lysines in sortase A*. Furthermore, we used this method for the intermolecular cross-linking between a peptide and a protein based on the p53-MDM2 interaction. These studies demonstrate the potential for palladium-mediated methods to serve as a platform for the development of future cross-linking techniques for peptides and proteins with natural amino acid residues.

Indexed as

Cross-Linking ReagentsCysteineLysineMolecular ConformationOrganometallic CompoundsOxidation-ReductionPalladiumPeptidesProteinsCross-Linking ReagentsCysteineLysineOrganometallic CompoundsPalladiumPeptidesProteins

Identifiers

PMID29406701
PMCPMC5831526
OpenAlexW2789652029

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.