Evidence map›Paper›PMID 29405082›Full record

ArticlePathogens and global health2018

Genotyping comparison of Mycobacterium leprae isolates by VNTR analysis from nasal samples in a Brazilian endemic region.

Luana Nepomueceno Costa Lima, Cristiane Cunha Frota, Phillip Noel Suffys, Amanda Nogueira Brum Fontes, Rosa Maria Salani Mota, Rosa Livia Freitas Almeida, Maria Araci de Andrade Pontes, Heitor de Sá Gonçalves, Carl Kendall, Ligia Regina Sansigolo Kerr

Open access · greenAbstract read
In one paragraph

Article in Pathogens and global health, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 99% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Luana Nepomueceno Costa Limaa Faculdade de Medicina, Departamento de Patologia e Medicina Legal , Federal University of Ceará , Fortaleza , Brazil.
Cristiane Cunha Frotaa Faculdade de Medicina, Departamento de Patologia e Medicina Legal , Federal University of Ceará , Fortaleza , Brazil.ORCID 0000-0003-0018-7736
Phillip Noel Suffysc Laboratório de Biologia Molecular Aplicada a Micobactérias , Instituto Oswaldo Cruz-Fiocruz , Rio de Janeiro , Brasil.
Amanda Nogueira Brum Fontesc Laboratório de Biologia Molecular Aplicada a Micobactérias , Instituto Oswaldo Cruz-Fiocruz , Rio de Janeiro , Brasil.
Rosa Maria Salani Motad Departamento de Estatística e Matemática Aplicada , Federal University of Ceará , Fortaleza , Brazil.
Rosa Livia Freitas Almeidae Programa de Pós-Graduação em Saúde Coletiva , Universidade de Fortaleza , Fortaleza , Brazil.
Maria Araci de Andrade Pontesf Department of the State of Ceará , Centro de Dermatologia Dona Libânia , Fortaleza , Brazil.
Heitor de Sá Gonçalvesf Department of the State of Ceará , Centro de Dermatologia Dona Libânia , Fortaleza , Brazil.
Carl Kendallg Department of Global Community Health and Behavioral Sciences, School of Public Health and Tropical Medicine , Tulane University , New Orleans , LA , USA.
Ligia Regina Sansigolo Kerrh Faculdade de Medicina, Departamento de Saúde Comunitária , Federal University of Ceará , Fortaleza , Brazil.
Universidade Federal do Ceará · BRFundação Oswaldo Cruz · BRInstituto de Dermatologia Dona Libania · BRTulane University · USUniversidade de Fortaleza · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study analyzed the genetic diversity by MIRU-VNTR of Mycobacterium leprae isolates from nasal cavities and related to epidemiological and clinical data. The sample consisted of 48 newly diagnosed leprosy cases that tested positive for M. leprae PCR in nasal secretion (NS) attending to the National Reference Center of Dermatology Dona Libania (CDERM), Fortaleza, Brazil. Total DNA was extracted from NS of each patient and used for amplification of four M. leprae VNTR loci. Four clusters of M. leprae isolates were formed with identical genotypes. In the spatial analysis, 12 leprosy cases presented similar genotypes organized into 4 clusters. The most common genotypes in the current study was AC8b: 8, AC9: 7, AC8a: 8, GTA9: 10, which may represent a genotype of circulating strains most often in Ceará. A minimum set of four MIRU-VNTR loci was demonstrated to study the genetic diversity of M. leprae isolates from NS.

Indexed as

Genetic VariationGenotypeMinisatellite RepeatsAdolescentAdultAgedBody FluidsBrazilChildCluster AnalysisCross-Sectional StudiesFemaleGenotyping TechniquesHumansLeprosyMaleBrazilcluster analysisgenetic markergenotypeLeprosyMycobacterium lepraenasal cavityVNTR loci

Identifiers

PMID29405082
PMCPMC6056818
OpenAlexW2789811113

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.