Evidence map›Paper›PMID 29404932›Full record

ArticleNeuroinformatics2018

Neuronal Activities in the Mouse Visual Cortex Predict Patterns of Sensory Stimuli.

Lei Cai, Bian Wu, Shuiwang Ji

Abstract read
PubMed Publisher
In one paragraph

Article in Neuroinformatics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Lei CaiSchool of Electrical Engineering and Computer Science, Washington State University, Pullman, WA, 99164, USA.
Bian WuSchool of Electrical Engineering and Computer Science, Washington State University, Pullman, WA, 99164, USA.
Shuiwang JiSchool of Electrical Engineering and Computer Science, Washington State University, Pullman, WA, 99164, USA. sji@eecs.wsu.edu.

Funding

Directorate for Biological Sciences 1641223Division of Information and Intelligent Systems 1615035
6 · The paper itself

Abstract

Visual cortex forms the basis of visual processing and plays important roles in visual encoding. By using the recently published Allen Brain Observatory dataset consisting of large-scale calcium imaging of mouse V1 activities under visual stimuli, we were able to obtain high-quality data capturing simultaneous neuronal activities at multiple sub-areas and cortical depths of V1. Using prediction models, we analyzed the activity profiles related to static and drifting grating stimuli. We conducted a comprehensive survey of the coding ability of multiple cortical locations toward different stimulus attributes. Specifically, we focused on orientations and spatial frequencies (for static stimuli), as well as moving directions and speed (for drifting stimuli). By using results produced from a prediction model, we quantified the decoding performance profile at different sub-areas and layers of V1. In addition, we analyzed the interactions and interference between different stimulus attributes. The insights obtained from these discoveries would contribute to more precise and quantitative understanding of V1 coding mechanisms.

Indexed as

AnimalsForecastingMiceMice, TransgenicMotion PerceptionNeuronsOrientationPhotic StimulationRandom AllocationVisual CortexAllen brain observatoryNeural activityPredictionSensory stimuliVisual coding

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.