Evidence map›Paper›PMID 29402985›Full record

ArticleScientific reports2018

Impact of overexpression of cytosolic isoform of O-acetylserine sulfhydrylase on soybean nodulation and nodule metabolome.

Hari B Krishnan, Bo Song, Nathan W Oehrle, Jeffrey C Cameron, Joseph M Jez

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Metabolomics as a Prospective Tool for Soybean (Current issues in molecular biology · 2022
    Review
  3. Article
  4. Review
  5. Article
  6. Biochemical and Anatomical Investigation ofInternational journal of molecular sciences · 2019
    Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 2 countries.

Hari B KrishnanUSDA-ARS, Plant Genetics Research Unit, 105 Curtis Hall, University of Missouri, Columbia, MO, 65211, USA. Hari.Krishnan@ARS.USDA.GOV.ORCID http://orcid.org/0000-0001-6437-3672
Bo SongUSDA-ARS, Plant Genetics Research Unit, 105 Curtis Hall, University of Missouri, Columbia, MO, 65211, USA.
Nathan W OehrleUSDA-ARS, Plant Genetics Research Unit, 105 Curtis Hall, University of Missouri, Columbia, MO, 65211, USA.
Jeffrey C CameronDepartment of Chemistry and Biochemistry, University of Colorado, Boulder, CO, 80309-0596, USA.
Joseph M JezDepartment of Biology, Washington University in St. Louis, St. Louis, Missouri, 63130, USA.
Agricultural Research Service · USNortheast Agricultural University · CNUniversity of Colorado Boulder · USUniversity of Missouri · USWashington University in St. Louis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nitrogen-fixing nodules, which are also major sites of sulfur assimilation, contribute significantly to the sulfur needs of whole soybean plants. Nodules are the predominant sites for cysteine accumulation and the activity of O-acetylserine(thiol)lyase (OASS) is central to the sulfur assimilation process in plants. Here, we examined the impact of overexpressing OASS on soybean nodulation and nodule metabolome. Overexpression of OASS did not affect the nodule number, but negatively impacted plant growth. HPLC measurement of antioxidant metabolites demonstrated that levels of cysteine, glutathione, and homoglutathione nearly doubled in OASS overexpressing nodules when compared to control nodules. Metabolite profiling by LC-MS and GC-MS demonstrated that several metabolites related to serine, aspartate, glutamate, and branched-chain amino acid pathways were significantly elevated in OASS overexpressing nodules. Striking differences were also observed in the flavonoid levels between the OASS overexpressing and control soybean nodules. Our results suggest that OASS overexpressing plants compensate for the increase in carbon requirement for sulfur assimilation by reducing the biosynthesis of some amino acids, and by replenishing the TCA cycle through fatty acid hydrolysis. These data may indicate that in OASS overexpressing soybean nodules there is a moderate decease in the supply of energy metabolites to the nodule, which is then compensated by the degradation of cellular components to meet the needs of the nodule energy metabolism.

Indexed as

Gene ExpressionMetabolomeAntioxidantsChromatography, High Pressure LiquidChromatography, LiquidCysteineCysteine SynthaseCytosolGas Chromatography-Mass SpectrometryGlutathioneGlycine maxProtein IsoformsRoot Nodules, PlantAntioxidantsCysteineCysteine SynthaseGlutathionehomoglutathioneProtein Isoforms

Identifiers

PMID29402985
PMCPMC5799319
OpenAlexW2792664957

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.