Evidence map›Paper›PMID 29402929›Full record

ArticleScientific reports2018

Generation of a rod-specific NRL reporter line in human pluripotent stem cells.

M Joseph Phillips, Elizabeth E Capowski, Andrew Petersen, Alex D Jansen, Katherine Barlow, Kimberly L Edwards, David M Gamm

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. CUT&TIME captures the history of open chromatin in developing neurons.bioRxiv : the preprint server for biology · 2025
    Article
  6. Review
  7. Article
  8. Animal models for the evaluation of retinal stem cell therapies.Progress in retinal and eye research · 2025
    Review
  9. Review
  10. Review
  11. Article
  12. Toward Retinal Organoids in High-Throughput.Cold Spring Harbor perspectives in medicine · 2024
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Re-formation of synaptic connectivity in dissociated human stem cell-derived retinal organoid cultures.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

M Joseph PhillipsWaisman Center, University of Wisconsin-Madison, Madison, WI, USA.
Elizabeth E CapowskiWaisman Center, University of Wisconsin-Madison, Madison, WI, USA.
Andrew PetersenWaisman Center, University of Wisconsin-Madison, Madison, WI, USA.
Alex D JansenWaisman Center, University of Wisconsin-Madison, Madison, WI, USA.
Katherine BarlowWaisman Center, University of Wisconsin-Madison, Madison, WI, USA.
Kimberly L EdwardsWaisman Center, University of Wisconsin-Madison, Madison, WI, USA.
David M GammWaisman Center, University of Wisconsin-Madison, Madison, WI, USA. dgamm@wisc.edu.
University of Wisconsin–Madison · US

Funding

WISCONSIN CENTER ON MENTAL RETARDATION: CORE SUPPORTP30HD003352 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI MESSING, ALBEE · 1985 to 2015
$25.2M
Waisman Intellectual and Developmental Disabilities Research Center Down Syndrome RegistryU54HD090256 · NICHD · UNIVERSITY OF WISCONSIN-MADISON · PI POLLAK, SETH D · 2016 to 2020
$6.0M
Mechanisms of Retinogenesis in Human Stem CellsR01EY021218 · NEI · UNIVERSITY OF WISCONSIN-MADISON · PI GAMM, DAVID M · 2010 to 2017
$2.2M
NEI NIH HHS R01 EY021218NICHD NIH HHS P30 HD003352NICHD NIH HHS U54 HD090256
6 · The paper itself

Abstract

Reporter lines generated in human pluripotent stem cells can be highly useful for the analysis of specific cell types and lineages in live cultures. We created the first human rod reporter line using CRISPR/Cas9 genome editing to replace one allele of the Neural Retina Leucine zipper (NRL) gene with an eGFP transgene in the WA09 human embryonic stem cell (hESC) line. After confirming successful targeting, three-dimensional optic vesicle structures were produced to examine reporter specificity and to track rod differentiation in culture. The NRL

Indexed as

Cell DifferentiationGenes, ReporterBasic-Leucine Zipper Transcription FactorsCell LineEye ProteinsGene EditingGreen Fluorescent ProteinsHumansPluripotent Stem CellsRecombination, GeneticRetinal Rod Photoreceptor CellsStaining and LabelingBasic-Leucine Zipper Transcription Factorsenhanced green fluorescent proteinEye ProteinsGreen Fluorescent ProteinsNRL protein, human

Identifiers

PMID29402929
PMCPMC5799252
OpenAlexW2803616467

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.