Evidence map›Paper›PMID 29402293›Full record

ArticleMalaria journal2018

Genetic variants of RNASE3 (ECP) and susceptibility to severe malaria in Senegalese population.

Gora Diop, Céline Derbois, Cheikh Loucoubar, Babacar Mbengue, Bineta Niakhana Ndao, Fatou Thiam, Alassane Thiam, Rokhaya Ndiaye, Yakhya Dieye, Robert Olaso and 2 more

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. PeerJ · 2022
    Article
  3. Emerging Evidence for Pleiotropism of Eosinophils.International journal of molecular sciences · 2021
    Review
  4. Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Gora DiopFaculté des Sciences et Techniques, Département de Biologie animale, Unité postulante de Biologie Génétique, Génomique et Bioinformatique (G2B), Université Cheikh Anta DIOP de Dakar, UCAD, Avenue Cheikh Anta DIOP, BP: 5005, Dakar, Sénégal. gora.diop@ucad.edu.sn.ORCID http://orcid.org/0000-0001-5626-6287
Céline DerboisUnité de Moyen-bas Débit, Institut de Génomique-CEA, Centre National de Recherche en Génomique Humaine, 2 rue Gaston Crémieux, CP 5721, 91057, Evry Cedex, France.
Cheikh LoucoubarGroupe G4, Biostatistique et Bioinformatique, Institut Pasteur de Dakar, 36, avenue Pasteur, BP: 220, Dakar, Senegal.
Babacar MbengueUnité d'Immunogénétique, Institut Pasteur de Dakar, 36, avenue Pasteur, BP: 220, Dakar, Senegal.
Bineta Niakhana NdaoFaculté des Sciences et Techniques, Département de Biologie animale, Unité postulante de Biologie Génétique, Génomique et Bioinformatique (G2B), Université Cheikh Anta DIOP de Dakar, UCAD, Avenue Cheikh Anta DIOP, BP: 5005, Dakar, Sénégal.
Fatou ThiamUnité d'Immunogénétique, Institut Pasteur de Dakar, 36, avenue Pasteur, BP: 220, Dakar, Senegal.
Alassane ThiamUnité d'Immunogénétique, Institut Pasteur de Dakar, 36, avenue Pasteur, BP: 220, Dakar, Senegal.
Rokhaya NdiayeUnité d'Immunogénétique, Institut Pasteur de Dakar, 36, avenue Pasteur, BP: 220, Dakar, Senegal.
Yakhya DieyeDépartement de Génie chimique et Biologie appliquée, Ecole Supérieure Polytechnique, Université Cheikh Anta DIOP de Dakar, UCAD, Avenue Cheikh Anta DIOP, BP: 5005, Dakar, Senegal.
Robert OlasoUnité de Moyen-bas Débit, Institut de Génomique-CEA, Centre National de Recherche en Génomique Humaine, 2 rue Gaston Crémieux, CP 5721, 91057, Evry Cedex, France.
Jean-Francois DeleuzeUnité de Moyen-bas Débit, Institut de Génomique-CEA, Centre National de Recherche en Génomique Humaine, 2 rue Gaston Crémieux, CP 5721, 91057, Evry Cedex, France.
Alioune DieyeUnité d'Immunogénétique, Institut Pasteur de Dakar, 36, avenue Pasteur, BP: 220, Dakar, Senegal.
Institut Pasteur de Dakar · SNCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRCheikh Anta Diop University · SN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSevere forms of malaria (SM) are an outcome of Plasmodium falciparum infection and can cause death especially in children under 4 years of age. RNASE3 (ECP) has been identified as an inhibitor of Plasmodium parasites growth in vitro, and genetic analysis in hospitalized Ghanaian subjects has revealed the RNASE3 +371G/C (rs2073342) polymorphism as a susceptibility factor for cerebral malaria. The +371 C allele results in an Arg/Thr mutation that abolishes the cytotoxic activity of the ECP protein. The present study aims to investigate RNASE3 gene polymorphisms and their putative link to severe malaria in a malaria cohort from Senegal. METHODS/

resultsPatients enrolled from hospitals were classified as having either uncomplicated (UM) or severe malaria (SM). The analysis of the RNASE3 gene polymorphisms was performed in 241 subjects: 178 falciparum infected (96 SM, 82 UM) and 63 non-infected subjects as population control group (CTR). Six frequent SNPs (MAF > 3%) were identified, and one SNP was associated with malaria severity by performing a logistic regression analysis SM vs.UM: RNASE3 +499G/C (rs2233860) under age, sex as covariates and HbS/HbC polymorphisms adjustment (p = 0.003, OR 0.43, CI 95% 0.20-0.92). The polymorphisms: +371G/C (rs2073342), +499G/C (rs2233860) and +577A/T (rs8019343) defined a haplotype risk (G-G-T) for malaria severity (Fisher exact test, p = 0.03) (OR 4.1, IC 95% (1.1-14.9).

conclusionIn addition to the previously described association of +371G/C polymorphism in Ghanaians cohort, the RNASE3 +499G/C polymorphism was associated with susceptibility to SM in a Senegalese population. The haplotype +371G/+499G/+577T defined by RNASE3 polymorphisms was associated with severity. The genetic association identified independently in the Senegalese population provide additional evidence of a role of RNASE3 (ECP) in malaria severity.

Indexed as

Malaria, CerebralMalaria, FalciparumAdolescentAdultAgedAged, 80 and overChildChild, PreschoolCohort StudiesEosinophil Cationic ProteinFemaleGenetic Predisposition to DiseaseHumansMaleMiddle AgedPolymorphism, Single NucleotideEosinophil Cationic ProteinRNASE3 protein, humanPlasmodium falciparumPolymorphismsRNase3 (ECP) geneSenegalSevere malariaSusceptibility

Identifiers

PMID29402293
PMCPMC5800030
OpenAlexW2795732837

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.