Evidence map›Paper›PMID 29400346›Full record

ArticleThe international journal of engineering and science2017

Unusual Stability of Anabaena Sensory Rhodopsin Transducer from

Vishwa D Trivedi, Tashmay S Jones, Renee P Walker

Open access · greenAbstract read
In one paragraph

Article in The international journal of engineering and science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 79% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Vishwa D TrivediDepartment of Natural Science, College of Science, Engineering and Mathematics, Bethune Cookman University, 640 Dr. Mary McLeod Bethune Blvd., Daytona Beach, Florida 32114, USA.
Tashmay S JonesDepartment of Natural Science, College of Science, Engineering and Mathematics, Bethune Cookman University, 640 Dr. Mary McLeod Bethune Blvd., Daytona Beach, Florida 32114, USA.
Renee P WalkerDepartment of Natural Science, College of Science, Engineering and Mathematics, Bethune Cookman University, 640 Dr. Mary McLeod Bethune Blvd., Daytona Beach, Florida 32114, USA.
Bethune-Cookman University · US

Funding

Ligand Binding and Signaling State of Anabaena Sensory Rhodopsin TransducerSC3GM113803 · NIGMS · BETHUNE-COOKMAN COLLEGE · PI TRIVEDI, VISHWA · 2015 to 2018
$379k
NIGMS NIH HHS SC3 GM113803
6 · The paper itself

Abstract

Advances in biotechnology generated wide range of microbial genome and their related protein database. Freshwater cyanobacterium Anabaena PCC7120 sensory rhodopsin, ASR in contrast to classical haloarchaeal sensory rhodopsins interacts with putative soluble transducer, ASRT. The 125 amino acid transducer exists as a soluble protein and is involved in photoreceptor binding. Recombinant DNA tools in biotechnology conventionally support the use of affinity tags for ease of protein purification and subsequent studies. The ASRT exists as a stable tetramer. Both X-ray crystal structure and solution NMR results with ASRT utilizing hexa-histidine affinity tag reveal it as a primarily β-stranded protein We have observed that the affinity tagged ASRT exhibits altered oligomeric stability. In this communication we outlined the effect of commonly used denaturant, Sodium Dodecyl Sulfate (SDS) on the tetrameric packing of ASRT. Our results support that N-terminus hexa-histidine tagged ASRT displayed unusual SDS-resistant structure. The unusual stability of ASRT and its homologues present in other microbial population could provide further insight towards their role in receptor, other ligand binding and signaling.

Indexed as

CyanobacteriaDomain of Unknown Function [DUF]Hexa-histidine tagOligomeric assemblySDS-resistant transducer

Identifiers

PMID29400346
PMCPMC5791768
OpenAlexW2910453965

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.