Evidence map›Paper›PMID 29398366›Full record

ArticleNeuron2018

Rbfox Splicing Factors Promote Neuronal Maturation and Axon Initial Segment Assembly.

Martin Jacko, Sebastien M Weyn-Vanhentenryck, John W Smerdon, Rui Yan, Huijuan Feng, Damian J Williams, Joy Pai, Ke Xu, Hynek Wichterle, Chaolin Zhang

Open access · bronzeAbstract read
In one paragraph

Article in Neuron, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 91 papers.

0numbers the graph read from it
0cells of the map it votes in
91citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

91 citing papers in PubMed, 137 citations in OpenAlex.

  1. Article
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  11. Ancestral intronic splicing regulatory elements in the SCNbioRxiv : the preprint server for biology · 2026
    Article
  12. Review
  13. A neuron type-specific microexon inbioRxiv : the preprint server for biology · 2025
    Article
  14. Science advances · 2025
    Article
  15. The Role of mRNA Alternative Processing in Mammalian Neurodevelopment.International journal of molecular sciences · 2025
    Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article

31 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Martin JackoDepartments of Systems Biology and Biochemistry and Molecular Biophysics, Center for Motor Neuron Biology and Disease, Columbia University, New York, NY 10032, USA; Departments of Pathology and Cell Biology, Neurology, and Neuroscience, Center for Motor Neuron Biology and Disease, Columbia Stem Cell Initiative, Columbia University, New York, NY 10032, USA.
Sebastien M Weyn-VanhentenryckDepartments of Systems Biology and Biochemistry and Molecular Biophysics, Center for Motor Neuron Biology and Disease, Columbia University, New York, NY 10032, USA.
John W SmerdonDepartments of Pathology and Cell Biology, Neurology, and Neuroscience, Center for Motor Neuron Biology and Disease, Columbia Stem Cell Initiative, Columbia University, New York, NY 10032, USA; Department of Physiology and Cellular Biophysics, Columbia University, New York, NY 10032, USA.
Rui YanDepartment of Chemistry, University of California, Berkeley, Berkeley, CA 94720, USA; Chan Zuckerberg Biohub, San Francisco, CA 94158, USA.
Huijuan FengDepartments of Systems Biology and Biochemistry and Molecular Biophysics, Center for Motor Neuron Biology and Disease, Columbia University, New York, NY 10032, USA; MOE Key Laboratory of Bioinformatics and Bioinformatics Division, TNLIST/Department of Automation, Tsinghua University, Beijing 100084, China.
Damian J WilliamsColumbia University Stem Cell Core Facility, Department of Rehabilitation and Regenerative Medicine, New York, NY 10032, USA.
Joy PaiDepartments of Systems Biology and Biochemistry and Molecular Biophysics, Center for Motor Neuron Biology and Disease, Columbia University, New York, NY 10032, USA.
Ke XuDepartment of Chemistry, University of California, Berkeley, Berkeley, CA 94720, USA; Chan Zuckerberg Biohub, San Francisco, CA 94158, USA.
Hynek WichterleDepartments of Pathology and Cell Biology, Neurology, and Neuroscience, Center for Motor Neuron Biology and Disease, Columbia Stem Cell Initiative, Columbia University, New York, NY 10032, USA. Electronic address: hw350@cumc.columbia.edu.
Chaolin ZhangDepartments of Systems Biology and Biochemistry and Molecular Biophysics, Center for Motor Neuron Biology and Disease, Columbia University, New York, NY 10032, USA. Electronic address: cz2294@columbia.edu.
Columbia University · USChan Zuckerberg Initiative (United States) · USUniversity of California, Berkeley · US

Funding

TRAINING IN CELLULAR, MOLECULAR AND BIOPHYSICAL STUDIEST32GM008224 · NIGMS · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI LIEM, RONALD K. · 1987 to 2021
$9.9M
Motor neuron selector genes and mechanism of their actionR01NS078097 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI WICHTERLE, HYNEK · 2012 to 2016
$2.7M
High-performance compute cluster for biomedical computingS10OD012351 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CALIFANO, ANDREA · 2012 to 2012
$2.0M
RNA regulatory networks in motor neuron development and functionR01NS089676 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ZHANG, CHAOLIN · 2015 to 2019
$1.8M
An integrative genomic strategy to infer global RNA regulatory networksR00GM095713 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ZHANG, CHAOLIN · 2013 to 2015
$747k
Storage System for High Performance ComputingS10OD021764 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CALIFANO, ANDREA · 2016 to 2016
$600k
Systematic functional dissection of neuronal transcriptome diversityR21NS098172 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ZHANG, CHAOLIN · 2016 to 2017
$438k
CLIP Tool Kit (CTK): pipeline, user interface and tutorials for CLIP data analysisR03HG009528 · NHGRI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ZHANG, CHAOLIN · 2017 to 2018
$160k
NHGRI NIH HHS R03 HG009528NIGMS NIH HHS R00 GM095713NIGMS NIH HHS T32 GM008224NIH HHS S10 OD012351NIH HHS S10 OD021764NINDS NIH HHS R01 NS078097NINDS NIH HHS R01 NS089676NINDS NIH HHS R21 NS098172
6 · The paper itself

Abstract

Neuronal maturation requires dramatic morphological and functional changes, but the molecular mechanisms governing this process are not well understood. Here, we studied the role of Rbfox1, Rbfox2, and Rbfox3 proteins, a family of tissue-specific splicing regulators mutated in multiple neurodevelopmental disorders. We generated Rbfox triple knockout (tKO) ventral spinal neurons to define a comprehensive network of alternative exons under Rbfox regulation and to investigate their functional importance in the developing neurons. Rbfox tKO neurons exhibit defects in alternative splicing of many cytoskeletal, membrane, and synaptic proteins, and display immature electrophysiological activity. The axon initial segment (AIS), a subcellular structure important for action potential initiation, is diminished upon Rbfox depletion. We identified an Rbfox-regulated splicing switch in ankyrin G, the AIS "interaction hub" protein, that regulates ankyrin G-beta spectrin affinity and AIS assembly. Our data show that the Rbfox-regulated splicing program plays a crucial role in structural and functional maturation of postmitotic neurons.

Indexed as

Alternative Splicing3T3 CellsAnimalsAnkyrinsAxon Initial SegmentDNA-Binding ProteinsEmbryonic Stem CellsGene Expression Regulation, DevelopmentalMiceMice, KnockoutNerve Tissue ProteinsNuclear ProteinsRNA Splicing FactorsSpinal CordAnk3 protein, mouseAnkyrinsDNA-Binding ProteinsNerve Tissue ProteinsNeuN protein, mouseNuclear ProteinsRbfox1 protein, mouseRbfox2 protein, mouseRNA Splicing Factorsactin cytoskeletonalternative splicingAnkGaxon initial segmentneuronal maturationRbfox

Identifiers

PMID29398366
PMCPMC5823762
OpenAlexW2747100022

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.