Evidence map›Paper›PMID 29395786›Full record

ArticleStructure (London, England : 1993)2018

An Intramolecular Interaction of UHRF1 Reveals Dual Control for Its Histone Association.

Linfeng Gao, Xiao-Feng Tan, Shen Zhang, Tianchen Wu, Zhi-Min Zhang, Hui-Wang Ai, Jikui Song

Open access · bronzeAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
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  6. UHRF1 Controls the Timing of RAD51 Removal During DNA Damage Repair Through Suppressing RFWD3.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Linfeng GaoEnvironmental Toxicology Graduate Program, University of California, Riverside, CA 92521, USA.
Xiao-Feng TanDepartment of Biochemistry, University of California, Riverside, CA 92521, USA.
Shen ZhangDepartment of Chemistry, University of California, Riverside, CA 92521, USA.
Tianchen WuEnvironmental Toxicology Graduate Program, University of California, Riverside, CA 92521, USA.
Zhi-Min ZhangDepartment of Biochemistry, University of California, Riverside, CA 92521, USA.
Hui-Wang AiEnvironmental Toxicology Graduate Program, University of California, Riverside, CA 92521, USA; Department of Chemistry, University of California, Riverside, CA 92521, USA; Center for Membrane and Cell Physiology, Department of Molecular Physiology and Biological Physics, and Department of Chemistry, University of Virginia, Charlottesville, VA 22908, USA.
Jikui SongEnvironmental Toxicology Graduate Program, University of California, Riverside, CA 92521, USA; Department of Biochemistry, University of California, Riverside, CA 92521, USA. Electronic address: jikui.song@ucr.edu.
University of California, Riverside · US

Funding

Mechanistic Insights into Mammalian DNA MethylationR35GM119721 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI Jikui Song · 2016 to 2026
$5.3M
Howard Hughes Medical InstituteNIGMS NIH HHS R35 GM119721
6 · The paper itself

Abstract

UHRF1 (ubiquitin-like, containing PHD and RING finger domains, 1) is one of the essential components of mammalian DNA methylation machinery. Chromatin association of UHRF1 is controlled via an interplay between its intramolecular interaction and dual recognition of histone H3 trimethylated at lysine 9 (H3K9me3) and hemimethylated DNA. Here, we report the crystal structure of the N-terminal tandem Tudor domain (TTD) of UHRF1 in complex with the C-terminal polybasic region (PBR). Structural analysis reveals that PBR binding leads to displacement of the TTD-plant homeodomain (PHD) linker, as well as blockage of the H3K9me3-engaging cage, both of which contribute to a chromatin-occluded UHRF1 conformation. Disruption of the TTD-PBR interaction, which is facilitated by the binding of UHRF1 to hemimethylated DNA or regulatory protein USP7, shifts the UHRF1 conformation toward an open state, allowing for efficient H3K9me3 binding. Together, this study provides structural basis for the allosteric regulation of UHRF1.

Indexed as

Allosteric RegulationBinding SitesCCAAT-Enhancer-Binding ProteinsCrystallography, X-RayDNA MethylationHistonesHumansModels, MolecularProtein BindingUbiquitin-Protein LigasesCCAAT-Enhancer-Binding ProteinsHistonesUbiquitin-Protein LigasesUHRF1 protein, humanallosteric regulationautoinhibitionDNA methylationepigeneticshistone modificationtandem Tudor domainUHRF1

Identifiers

PMID29395786
PMCPMC5803408
OpenAlexW2784474489

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.