Evidence map›Paper›PMID 29394372›Full record

ArticleJournal of experimental botany2018

Jasmonate-responsive MYB factors spatially repress rutin biosynthesis in Fagopyrum tataricum.

Kaixuan Zhang, Maria D Logacheva, Yu Meng, Jianping Hu, Dongpu Wan, Long Li, Dagmar Janovská, Zhiyong Wang, Milen I Georgiev, Zhuo Yu and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 117 citations in OpenAlex.

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  20. CRISPR/Cas9-Mediated Targeted Mutagenesis ofFrontiers in plant science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 10 institutions in 4 countries.

Kaixuan ZhangInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Maria D LogachevaDepartment of Evolutionary Biochemistry, AN Belozersky Institute of Physico-Chemical Biology, MV Lomonosov Moscow State University, Moscow, Russia.
Yu MengCollege of Landscape and Travel, Agricultural University of Hebei, Baoding, China.
Jianping HuCollege of Agricultural Science, Xichang University, Xichang, Sichuan, China.
Dongpu WanInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Long LiInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Dagmar JanovskáDepartment of Gene Bank, Crop Research Institute, Drnovská, Czech Republic.
Zhiyong WangCollege of Agriculture, Hainan University, Haikou, Hainan, China.
Milen I GeorgievGroup of Plant Cell Biotechnology and Metabolomics, The Stephan Angeloff Institute of Microbiology, Bulgarian Academy of Sciences, Plovdiv, Bulgaria.
Zhuo YuCollege of Agriculture, Inner Mongolia Agricultural University, Hohhot, Inner Mongolia, China.
Fuyu YangGrassland Institute, China Agricultural University, Beijing, China.
Mingli YanSchool of Life Sciences, Hunan University of Science and Technology, Xiangtan, Hunan, China.
Meiliang ZhouInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing, China.
Chinese Academy of Agricultural Sciences · CNHunan University of Science and Technology · CNCrop Research Institute · CZHainan University · CNHebei Agricultural University · CNInner Mongolia Agricultural University · CNInstitute of Grassland Research · CNLomonosov Moscow State University · RUStephan Angeloff Institute of Microbiology · BGXichang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Jasmonates are plant hormones that induce the accumulation of many secondary metabolites, such as rutin in buckwheat, via regulation of jasmonate-responsive transcription factors. Here, we report on the identification of a clade of jasmonate-responsive subgroup 4 MYB transcription factors, FtMYB13, FtMYB14, FtMYB15, and FtMYB16, which directly repress rutin biosynthesis in Fagopyrum tataricum. Immunoblot analysis showed that FtMYB13, FtMYB14, and FtMYB15 could be degraded via the 26S proteasome in the COI1-dependent jasmonate signaling pathway, and that this degradation is due to the SID motif in their C-terminus. Yeast two-hybrid and bimolecular fluorescence complementation assays revealed that FtMYB13, FtMYB14, and FtMYB15 interact with the importin protein Sensitive to ABA and Drought 2 (FtSAD2) in stem and inflorescence. Furthermore, the key repressor of jasmonate signaling FtJAZ1 specifically interacts with FtMYB13. Point mutation analysis showed that the conserved Asp residue of the SID domain contributes to mediating protein-protein interaction. Protoplast transient activation assays demonstrated that FtMYB13, FtMYB14, and FtMYB15 directly repress phenylalanine ammonia lyase (FtPAL) gene expression, and FtSAD2 and FtJAZ1 significantly promote the repressing activity of FtMYBs. These findings may ultimately be promising for further engineering of plant secondary metabolism.

Indexed as

CyclopentanesFagopyrumGene Expression Regulation, PlantMultigene FamilyOxylipinsPhenylalanine Ammonia-LyasePlant Growth RegulatorsPlant ProteinsProtein BindingProtein DomainsRutinTranscription FactorsCyclopentanesjasmonic acidOxylipinsPhenylalanine Ammonia-LyasePlant Growth RegulatorsPlant ProteinsRutinTranscription Factors

Identifiers

PMID29394372
PMCPMC6018783
OpenAlexW2791314301

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.