Evidence map›Paper›PMID 29394137›Full record

ArticlePrion2018

Genetic effects of PRNP gene insertion/deletion (indel) on phenotypic traits in sheep.

Jie Li, Sarantsetseg Erdenee, Shaoli Zhang, Zhenyu Wei, Meng Zhang, Yunyun Jin, Hui Wu, Hong Chen, Xiuzhu Sun, Hongwei Xu and 2 more

Open access · goldAbstract read
In one paragraph

Article in Prion, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Novel InDels ofAnimals : an open access journal from MDPI · 2020
    Article
  7. A Deletion Downstream of theAnimals : an open access journal from MDPI · 2020
    Article
  8. Article
  9. Article
  10. Genetic variations in the sheepArchives animal breeding · 2019
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Jie Lia College of Animal Science and Technology, Innovation Experimental College, Northwest A&F University , Xi'an, Shaanxi , China.
Sarantsetseg Erdeneeb College of Animal Science and Technology, Northwest A&F University , Xi'an , Shaanxi , China.
Shaoli Zhanga College of Animal Science and Technology, Innovation Experimental College, Northwest A&F University , Xi'an, Shaanxi , China.
Zhenyu Weib College of Animal Science and Technology, Northwest A&F University , Xi'an , Shaanxi , China.
Meng Zhangb College of Animal Science and Technology, Northwest A&F University , Xi'an , Shaanxi , China.
Yunyun Jinb College of Animal Science and Technology, Northwest A&F University , Xi'an , Shaanxi , China.
Hui Wub College of Animal Science and Technology, Northwest A&F University , Xi'an , Shaanxi , China.
Hong Chenc Shaanxi Key Laboratory of Molecular Biology for Agriculture, College of Animal Science and Technology, Northwest A&F University , Yangling , Shaanxi , China.
Xiuzhu Sunb College of Animal Science and Technology, Northwest A&F University , Xi'an , Shaanxi , China.
Hongwei Xud Science Experimental Center, College of Life Science and Engineering, Northwest University for Nationalities , Chengguan District, Lanzhou City in northwest, Lanzhou , Gansu , China.
Yong Caid Science Experimental Center, College of Life Science and Engineering, Northwest University for Nationalities , Chengguan District, Lanzhou City in northwest, Lanzhou , Gansu , China.
Xianyong Lanb College of Animal Science and Technology, Northwest A&F University , Xi'an , Shaanxi , China.
Northwest A&F University · CNNorthwest Minzu University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Prion protein (PRNP) gene is well known for affecting mammal transmissible spongiform encephalopathies (TSE), and is also reported to regulate phenotypic traits (e.g. growth traits) in healthy ruminants. To identify the insertion/deletion (indel) variations of the PRNP gene and evaluate their effects on growth traits, 768 healthy individuals from five sheep breeds located in China and Mongolia were identified and analyzed. Herein, four novel indel polymorphisms, namely, Intron-1-insertion-7bp (I1-7bp), Intron-2-insertion-15bp (I2-15bp), Intron-2-insertion-19bp (I2-19bp), and 3' UTR-insertion-7bp (3' UTR-7bp), were found in the sheep PRNP gene. In five analyzed breeds, the minor allelic frequencies (MAF) of the above indels were in the range of 0.008 to 0.986 (I1-7bp), 0.113 to 0.336 (I2-15bp), 0.281 to 0.510 (I2-19bp), and 0.040 to 0.238 (3' UTR-7bp). Additionally, there were 15 haplotypes and the haplotype 'I

Indexed as

Gene DeletionINDEL MutationMutagenesis, InsertionalAnimalsBreedingChinaGenetic LociHaplotypesMongoliaPhenotypePrion ProteinsSheepTailThoraxPrion Proteinsassociationgrowth traitsinsertion/deletion (indel)PRNP genesheep

Identifiers

PMID29394137
PMCPMC5871074
OpenAlexW2790777653

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.