Evidence map›Paper›PMID 29391512›Full record

ArticleScientific reports2018

Phenome of pearl quality traits in the mollusc transplant model Pinctada margaritifera.

Chin-Long Ky, Virgile Quillien, Floriane Broustal, Claude Soyez, Dominique Devaux

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
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  6. Microbiome of the Black-Lipped Pearl OysterFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Chin-Long KyIfremer, UMR 241, EIO, Labex Corail, Centre du Pacifique, BP 49, 98719, Taravao, Tahiti, Polynésie Française. chinky@ifremer.fr.
Virgile QuillienIfremer, UMR 241, EIO, Labex Corail, Centre du Pacifique, BP 49, 98719, Taravao, Tahiti, Polynésie Française.
Floriane BroustalIfremer, UMR 241, EIO, Labex Corail, Centre du Pacifique, BP 49, 98719, Taravao, Tahiti, Polynésie Française.
Claude SoyezIfremer, UMR 241, EIO, Labex Corail, Centre du Pacifique, BP 49, 98719, Taravao, Tahiti, Polynésie Française.
Dominique DevauxSCA Regahiga Pearls, BP 48, 98755, Rikitea, Gambier, Polynésie Française.
Ecosystèmes Insulaires OcéaniensLabex Corail · FRLeonardo (Italy) · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The bivalve Pinctada margaritifera exhibits three main transplant phenotypes derived from the donor (from which a mantle graft tissue, the saibo, is excised), the recipient (into which the saibo is implanted with a nucleus, leading to the formation of a pearl sac "chimera") and the cultured pearls themselves. This first phenome study on the species derived from a large experimental graft. Transplant phenotype was assessed at three scales: 1) macro, pearl size, colour, grade, 2) micro, pearl surface microstructure, and 3) molecular, biomineralisation gene expression level in saibo and pearl sac tissues. From donor to pearl, the phenome revealed fine variations of quality traits dependent on the position on the mantle where the saibo was cut, whose variation could overlap with inter-individual donor phenotype differences. A single donor phenotype could therefore produce multiple pearl phenotypes at the scale of the saibo position, mirroring its original activity at the mantle position level and the colour and shape of the shell. This phenome study provides essential information on phenotypic trait architecture enabling us to explore and explain the main biological functions and pave the way for a phenomic project on P. margaritifera that could benefit the pearl industry.

Indexed as

Genetic MarkersPhenotypeQuantitative Trait LociAnimalsAnimal ShellsAnimal StructuresBiomineralizationColorGene Expression ProfilingModels, AnimalPinctadaGenetic Markers

Identifiers

PMID29391512
PMCPMC5794767
OpenAlexW2786971293

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.