ArticleScientific reports2018
Comparative transcriptome analysis reveals molecular response to salinity stress of salt-tolerant and sensitive genotypes of indica rice at seedling stage.
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.
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44 citing papers in PubMed.
- (E)-2-Hexenal Combats Rice Sheath Blight Through Direct Pathogen Inhibition and Host Defense Reprogramming.Plants (Basel, Switzerland) · 2026Article
- Identification of common transcriptional responses to salinity of two halophytes: Bruguiera gymnorrhiza and Populus euphratica.Scientific reports · 2026Article
- Comparative Transcriptomic Analysis Reveals Salt Stress Adaptation Mechanisms in Cultivated Rice Varieties (Current issues in molecular biology · 2026Article
- Temporal Transcriptomic and Metabolomic Reprogramming Unveils a Two-Phase Salt Tolerance Mechanism inInternational journal of molecular sciences · 2026Article
- Transcriptomic analysis of Thai rice varieties at the reproductive stage uncovers potential genetic determinants of salt tolerance.BMC plant biology · 2025Article
- Impact of redox control on transcriptional reprograming for salt tolerance in coastal rice landraces.Scientific reports · 2025Article
- OsWNK9 regulates the expression of key transcription factors, phytohormonal, and transporters genes to improve salinity stress tolerance in rice.Scientific reports · 2025Article
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- Comparative Transcriptome and Hormonal Analysis Reveals the Mechanisms of Salt Tolerance in Rice.International journal of molecular sciences · 2025Article
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- Gene metabolite relationships revealed metabolic adaptations of rice salt tolerance.Scientific reports · 2025Article
- MIKC-type MADS-box transcription factor OsMADS31 positively regulates salinity tolerance in rice.Frontiers in plant science · 2025Article
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- Comparative Physiological and Transcriptomic Analyses of Oat (Plants (Basel, Switzerland) · 2024Article
- The Multiple Promoting Effects ofPlants (Basel, Switzerland) · 2024Article
- The comparative transcriptome analysis of two green super rice genotypes with varying tolerance to salt stress.Molecular biology reports · 2023Article
- The Potential of Endophytes in Improving Salt-Alkali Tolerance and Salinity Resistance in Plants.International journal of molecular sciences · 2023Review
- Comparative transcriptome analysis of gene responses of salt-tolerant and salt-sensitive rice cultivars to salt stress.Scientific reports · 2023Article
- Cytological, transcriptome and miRNome temporal landscapes decode enhancement of rice grain size.BMC biology · 2023Article
- Article
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9 authors.
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Abstract
Abiotic stresses, such as salinity, greatly threaten the growth and productivity of plants. Rice (Oryza sativa L.) is one of the most important food crops, as well as a monocot model for genomic research. To obtain a global view of the molecular response to salinity stress, we conducted a leaf transcriptome analysis on rice seedlings. Two cultivars of rice subspecies indica, including the salt-tolerant genotype Xian156 and the salt-sensitive genotype IR28, were used in the present study. Eighteen RNA libraries were obtained from these two genotypes at three timepoints (0 h, 48 h and 72 h) after applying salinity stress. We obtained the reference-guided assembly of the rice transcriptome, which resulted in 1,375 novel genes, including 1,371 annotated genes. A comparative analysis between genotypes and time points showed 5,273 differentially expressed genes (DEGs), of which 286 DEGs were only found in the tolerant genotype. The Disease resistance response protein 206 and TIFY 10 A were differentially expressed, which were validated by quantitative real-time PCR. The differentially expressed genes identified through the mRNA transcriptome, along with the structure, provide a revealing insight into rice molecular response to salinity stress and underlie the salinity tolerance mechanism between genotypes.
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