Evidence map›Paper›PMID 29391402›Full record

ArticleScientific reports2018

Differentiated surface fungal communities at point of harvest on apple fruits from rural and peri-urban orchards.

Youming Shen, Jiyun Nie, Zhixia Li, Haifei Li, Yonglong Wu, Yafeng Dong, Jianyi Zhang

Erratum issuedAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
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  5. Fungi fromFrontiers in cellular and infection microbiology · 2025
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  7. Article
  8. Article
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  18. Endomicrobial Community Profiles of Two Different Mealybugs:Journal of microbiology and biotechnology · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Youming ShenInstitute of Pomology, Chinese Academy of Agricultural Sciences, Xingcheng, 125100, P.R. China.
Jiyun NieInstitute of Pomology, Chinese Academy of Agricultural Sciences, Xingcheng, 125100, P.R. China. jiyunnie@163.com.
Zhixia LiInstitute of Pomology, Chinese Academy of Agricultural Sciences, Xingcheng, 125100, P.R. China.
Haifei LiInstitute of Pomology, Chinese Academy of Agricultural Sciences, Xingcheng, 125100, P.R. China.
Yonglong WuInstitute of Pomology, Chinese Academy of Agricultural Sciences, Xingcheng, 125100, P.R. China.
Yafeng DongInstitute of Pomology, Chinese Academy of Agricultural Sciences, Xingcheng, 125100, P.R. China.
Jianyi ZhangInstitute of Pomology, Chinese Academy of Agricultural Sciences, Xingcheng, 125100, P.R. China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The diverse fungal communities that colonize fruit surfaces are closely associated with fruit development, preservation and quality control. However, the overall fungi adhering to the fruit surface and the inference of environmental factors are still unknown. Here, we characterized the fungal signatures on apple surfaces by sequencing internal transcribed spacer 1 (ITS1) region. We collected the surface fungal communities from apple fruits cultivated in rural and peri-urban orchards. A total of 111 fungal genera belonging to 4 phyla were identified, showing remarkable fungal diversity on the apple surface. Comparative analysis of rural samples harboured higher fungal diversity than those from peri-urban orchards. In addition, fungal composition varied significantly across apple samples. At the genus level, the protective genera Coniothyrium, Paraphaeosphaeria and Periconia were enriched in rural samples. The pathogenic genera Acremonium, Aspergillus, Penicillium and Tilletiposis were enriched in peri-urban samples. Our findings indicate that rural samples maintained more diverse fungal communities on apple surfaces, whereas peri-urban-planted apple carried potential pathogenic risks. This study sheds light on ways to improve fruit cultivation and disease prevention practices.

Indexed as

DNA, FungalDNA, Ribosomal SpacerFruitFungiGene Expression Regulation, FungalGenetic MarkersMalusPhylogenyPlant DiseasesSocial PlanningDNA, FungalDNA, Ribosomal SpacerGenetic Markers

Identifiers

PMID29391402
PMCPMC5794916

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.