Evidence map›Paper›PMID 29391170›Full record

ArticleJournal of molecular biology2018

EzMol: A Web Server Wizard for the Rapid Visualization and Image Production of Protein and Nucleic Acid Structures.

Christopher R Reynolds, Suhail A Islam, Michael J E Sternberg

Abstract read
In one paragraph

Article in Journal of molecular biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 102 papers.

0numbers the graph read from it
0cells of the map it votes in
102citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

102 citing papers in PubMed.

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  13. Contribution of the gonococcalInfection and immunity · 2025
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42 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Christopher R ReynoldsCentre for Integrative Systems Biology and Bioinformatics, Department of Life Sciences, Imperial College London, Kensington, London SW7 2AZ, UK. Electronic address: cr308@imperial.ac.uk.
Suhail A IslamCentre for Integrative Systems Biology and Bioinformatics, Department of Life Sciences, Imperial College London, Kensington, London SW7 2AZ, UK.
Michael J E SternbergCentre for Integrative Systems Biology and Bioinformatics, Department of Life Sciences, Imperial College London, Kensington, London SW7 2AZ, UK.

Funding

Biotechnology and Biological Sciences Research Council BB/E000940/1Wellcome Trust 104955
6 · The paper itself

Abstract

EzMol is a molecular visualization Web server in the form of a software wizard, located at http://www.sbg.bio.ic.ac.uk/ezmol/. It is designed for easy and rapid image manipulation and display of protein molecules, and is intended for users who need to quickly produce high-resolution images of protein molecules but do not have the time or inclination to use a software molecular visualization system. EzMol allows the upload of molecular structure files in PDB format to generate a Web page including a representation of the structure that the user can manipulate. EzMol provides intuitive options for chain display, adjusting the color/transparency of residues, side chains and protein surfaces, and for adding labels to residues. The final adjusted protein image can then be downloaded as a high-resolution image. There are a range of applications for rapid protein display, including the illustration of specific areas of a protein structure and the rapid prototyping of images.

Indexed as

Models, MolecularNucleic Acid ConformationProtein ConformationSoftwareUser-Computer InterfaceWeb BrowserDatabases, GeneticEzMolgraphicsmolecular viewerServervisualization

Identifiers

PMID29391170
PMCPMC5961936

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.