Evidence map›Paper›PMID 29389997›Full record

ArticlePloS one2018

Rhodopsin optogenetic toolbox v2.0 for light-sensitive excitation and inhibition in Caenorhabditis elegans.

Amelie Bergs, Christian Schultheis, Elisabeth Fischer, Satoshi P Tsunoda, Karen Erbguth, Steven J Husson, Elena Govorunova, John L Spudich, Georg Nagel, Alexander Gottschalk and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 61 citations in OpenAlex.

  1. Review
  2. Stabilized Ion Selectivity Corrects Activation Drift in Kalium Channelrhodopsins.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  3. Article
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  11. Multisensory Integration inBrain sciences · 2022
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Rhodopsin-based voltage imaging tools for use in muscles and neurons ofProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  17. Article
  18. Article
  19. Novel Technological Advances in Functional Connectomics inJournal of developmental biology · 2019
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Amelie BergsBuchmann Institute for Molecular Life Sciences, Goethe-University, Frankfurt, Germany.
Christian SchultheisBuchmann Institute for Molecular Life Sciences, Goethe-University, Frankfurt, Germany.
Elisabeth FischerBuchmann Institute for Molecular Life Sciences, Goethe-University, Frankfurt, Germany.
Satoshi P TsunodaBuchmann Institute for Molecular Life Sciences, Goethe-University, Frankfurt, Germany.
Karen ErbguthBuchmann Institute for Molecular Life Sciences, Goethe-University, Frankfurt, Germany.
Steven J HussonSystemic Physiological & Ecotoxicological Research (SPHERE), University of Antwerp, Antwerp, Belgium.
Elena GovorunovaCenter for Membrane Biology, Department of Biochemistry and Molecular Biology, University of Texas Health Science Center at Houston, McGovern Medical School, Houston, Texas, United States of America.
John L SpudichCenter for Membrane Biology, Department of Biochemistry and Molecular Biology, University of Texas Health Science Center at Houston, McGovern Medical School, Houston, Texas, United States of America.
Georg NagelDepartment of Biology, Institute for Molecular Plant Physiology and Biophysics, Julius-Maximilians-University of Würzburg, Würzburg, Germany.
Alexander GottschalkBuchmann Institute for Molecular Life Sciences, Goethe-University, Frankfurt, Germany.ORCID 0000-0002-1197-6119
Jana F LiewaldBuchmann Institute for Molecular Life Sciences, Goethe-University, Frankfurt, Germany.
Goethe University Frankfurt · DEThe University of Texas Health Science Center at Houston · USUniversity of Antwerp · BEUniversity of Würzburg · DE

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
NIH HHS P40 OD010440
6 · The paper itself

Abstract

In optogenetics, rhodopsins were established as light-driven tools to manipulate neuronal activity. However, during long-term photostimulation using channelrhodopsin (ChR), desensitization can reduce effects. Furthermore, requirement for continuous presence of the chromophore all-trans retinal (ATR) in model systems lacking sufficient endogenous concentrations limits its applicability. We tested known, and engineered and characterized new variants of de- and hyperpolarizing rhodopsins in Caenorhabditis elegans. ChR2 variants combined previously described point mutations that may synergize to enable prolonged stimulation. Following brief light pulses ChR2(C128S;H134R) induced muscle activation for minutes or even for hours ('Quint': ChR2(C128S;L132C;H134R;D156A;T159C)), thus featuring longer open state lifetime than previously described variants. Furthermore, stability after ATR removal was increased compared to the step-function opsin ChR2(C128S). The double mutants C128S;H134R and H134R;D156C enabled increased effects during repetitive stimulation. We also tested new hyperpolarizers (ACR1, ACR2, ACR1(C102A), ZipACR). Particularly ACR1 and ACR2 showed strong effects in behavioral assays and very large currents with fast kinetics. In sum, we introduce highly light-sensitive optogenetic tools, bypassing previous shortcomings, and thus constituting new tools that feature high effectiveness and fast kinetics, allowing better repetitive stimulation or investigating prolonged neuronal activity states in C. elegans and, possibly, other systems.

Indexed as

LightOptogeneticsAnimalsAnimals, Genetically ModifiedCaenorhabditis elegansHEK293 CellsHumansMicroscopy, FluorescencePoint MutationRhodopsinRhodopsin

Identifiers

PMID29389997
PMCPMC5794093
OpenAlexW2787687110

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.