Evidence map›Paper›PMID 29389847›Full record

ArticleInternational journal of molecular sciences2018

A Phenotyping Method of Giant Cells from Root-Knot Nematode Feeding Sites by Confocal Microscopy Highlights a Role for CHITINASE-LIKE 1 in Arabidopsis.

Javier Cabrera, Rocio Olmo, Virginia Ruiz-Ferrer, Isidro Abreu, Christian Hermans, Isabel Martinez-Argudo, Carmen Fenoll, Carolina Escobar

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
6.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  8. Biocontrol ofFrontiers in plant science · 2022
    Article
  9. Article
  10. Frontiers in plant science · 2021
    Article
  11. Article
  12. Review
  13. Tomato and MelonFrontiers in plant science · 2020
    Article
  14. Review
  15. Review
  16. Plant Defense Genes against Biotic Stresses.International journal of molecular sciences · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Javier CabreraFacultad de Ciencias Ambientales y Bioquímica, Universidad de Castilla-La Mancha, Área de Fisiología Vegetal, Avda, Carlos III, s/n, 45071 Toledo, Spain. javier.cabrerachaves@uclm.es.
Rocio OlmoFacultad de Ciencias Ambientales y Bioquímica, Universidad de Castilla-La Mancha, Área de Fisiología Vegetal, Avda, Carlos III, s/n, 45071 Toledo, Spain. rocio.olmo@uclm.es.
Virginia Ruiz-FerrerFacultad de Ciencias Ambientales y Bioquímica, Universidad de Castilla-La Mancha, Área de Fisiología Vegetal, Avda, Carlos III, s/n, 45071 Toledo, Spain. Virginia.Ruiz@uclm.es.
Isidro AbreuCentro de Biotecnología y Genómica de Plantas (UPM-INIA), Pozuelo de Alarcón, 28223 Madrid, Spain. isidro.abreu@upm.es.ORCID 0000-0002-1647-9883
Christian HermansLaboratory of Plant Physiology and Molecular Genetics, Université libre de Bruxelles, Campus Plaine CP 242, Bd du Triomphe, 1050 Brussels, Belgium. Christian.Hermans@ulb.ac.be.
Isabel Martinez-ArgudoFacultad de Ciencias Ambientales y Bioquímica, Universidad de Castilla-La Mancha, Área de Genética, Avda, Carlos III, s/n, 45071 Toledo, Spain. Isabel.MArgudo@uclm.es.
Carmen FenollFacultad de Ciencias Ambientales y Bioquímica, Universidad de Castilla-La Mancha, Área de Fisiología Vegetal, Avda, Carlos III, s/n, 45071 Toledo, Spain. carmen.fenoll@uclm.es.ORCID 0000-0003-4653-6268
Carolina EscobarFacultad de Ciencias Ambientales y Bioquímica, Universidad de Castilla-La Mancha, Área de Fisiología Vegetal, Avda, Carlos III, s/n, 45071 Toledo, Spain. carolina.escobar@uclm.es.
University of Castilla-La Mancha · ESCentre for Plant Biotechnology and Genomics · ESUniversité Libre de Bruxelles · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Most effective nematicides for the control of root-knot nematodes are banned, which demands a better understanding of the plant-nematode interaction. Understanding how gene expression in the nematode-feeding sites relates to morphological features may assist a better characterization of the interaction. However, nematode-induced galls resulting from cell-proliferation and hypertrophy hinders such observation, which would require tissue sectioning or clearing. We demonstrate that a method based on the green auto-fluorescence produced by glutaraldehyde and the tissue-clearing properties of benzyl-alcohol/benzyl-benzoate preserves the structure of the nematode-feeding sites and the plant-nematode interface with unprecedented resolution quality. This allowed us to obtain detailed measurements of the giant cells' area in an

Indexed as

AnimalsArabidopsisArabidopsis ProteinsCucumis sativusGiant CellsGlycoside HydrolasesHost-Parasite InteractionsMedicagoMicroscopy, ConfocalPhenotypePlant DiseasesPlant RootsPlants, Genetically ModifiedPlant TumorsTylenchoideaArabidopsis ProteinsCTL1 protein, ArabidopsisGlycoside HydrolasesBABBclearingconfocal microscopyCTL1giant cellsMeloidogyne spp.nodulessyncytia

Identifiers

PMID29389847
PMCPMC5855651
OpenAlexW2792155111

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.