Evidence map›Paper›PMID 29389011›Full record

ReviewFEBS letters2018

Reprogramming cell fate with artificial transcription factors.

Evan A Heiderscheit, Asuka Eguchi, Mackenzie C Spurgat, Aseem Z Ansari

Open access · bronzeAbstract readReview
In one paragraph

Review in FEBS letters, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Induced Pluripotency: A Powerful Tool for In Vitro Modeling.International journal of molecular sciences · 2020
    Review
  6. Epigenetic Control of a Local Chromatin Landscape.International journal of molecular sciences · 2020
    Review
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Evan A HeiderscheitDepartment of Biochemistry, University of Wisconsin - Madison, WI, USA.
Asuka EguchiDepartment of Biochemistry, University of Wisconsin - Madison, WI, USA.
Mackenzie C SpurgatDepartment of Biochemistry, University of Wisconsin - Madison, WI, USA.
Aseem Z AnsariDepartment of Biochemistry, University of Wisconsin - Madison, WI, USA.
University of Wisconsin–Madison · USEnergy Center of Wisconsin · US

Funding

Midwest Progenitor Cell ConsortiumU01HL099773 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI THOMSON, JAMES ALEXANDER · 2009 to 2015
$7.8M
Targeting Leukemia causing oncogene E2a-Pbx1 with synthetic moleculesR01CA133508 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI ANSARI, ASEEM Z · 2008 to 2012
$1.5M
NCI NIH HHS R01 CA133508NHLBI NIH HHS U01 HL099773
6 · The paper itself

Abstract

Transcription factors (TFs) reprogram cell states by exerting control over gene regulatory networks and the epigenetic landscape of a cell. Artificial transcription factors (ATFs) are designer regulatory proteins comprised of modular units that can be customized to overcome challenges faced by natural TFs in establishing and maintaining desired cell states. Decades of research on DNA-binding proteins and synthetic molecules has provided a molecular toolkit for ATF design and the construction of genome-scale libraries of ATFs capable of phenotypic manipulation and reprogramming of cell states. Here, we compare the unique strengths and limitations of different ATF platforms, highlight the advantages of cooperative assembly, and present the potential of ATF libraries in revealing gene regulatory networks that govern cell fate choices.

Indexed as

Cellular ReprogrammingEpigenesis, GeneticGene Regulatory NetworksTranscription FactorsAnimalsCellular Reprogramming TechniquesHumansTranscription Factorsartificial transcription factorcell fatereprogramming

Identifiers

PMID29389011
PMCPMC5869137
OpenAlexW2790869133

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.