ArticleScientific reports2018
Plastid super-barcodes as a tool for species discrimination in feather grasses (Poaceae: Stipa).
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.
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54 citing papers in PubMed.
- Comparative analysis the complete chloroplast genomes in wild Musa species of India for its phylogenetic and taxonomic implications.BMC plant biology · 2025Article
- Comparative and phylogenetic analyses of Stipa L. (Poaceae) species based on the complete chloroplast genome sequences.BMC plant biology · 2025Article
- Integrated genomics and morphological approach reveals interspecific gene flow cases and decodes the origin of selected feathergrasses (Poaceae, Stipa).Scientific reports · 2025Article
- Phylogenetic reconstruction and species delimitation in Stipeae with special reference to Stipa (Poaceae, Pooideae) using mitochondrial genomes.Cladistics : the international journal of the Willi Hennig Society · 2025Article
- Exploring the plastome diversity of fifteen centuries-old olive trees (Frontiers in plant science · 2025Article
- Complete chloroplast genomes of threeFrontiers in plant science · 2025Article
- Comparative chloroplast genomes and phylogenetic analysis of theFrontiers in plant science · 2025Article
- Chloroplast genome-based genetic resources via genome skimming for the subalpine forests of Japan and adjacent regions.Ecology and evolution · 2024Article
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- The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2024Article
- DNA barcoding in herbal medicine: Retrospective and prospective.Journal of pharmaceutical analysis · 2023Review
- Decoding the complete chloroplast genome ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2023Article
- The complete chloroplast genome sequence of Vincetoxicum mongolicum (Apocynaceae), a perennial medicinal herb.Genetics and molecular biology · 2023Article
- The complete chloroplast genome and phylogenetic analysis ofMitochondrial DNA. Part B, Resources · 2023Article
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- Elucidation of the evolutionary history ofFrontiers in plant science · 2023Article
- The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2023Article
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5 authors.
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Abstract
Present study was designed to verify which or if any of plastome loci is a hotspot region for mutations and hence might be useful for molecular species identification in feather grasses. 21 newly sequenced complete plastid genomes representing 19 taxa from the genus of Stipa were analyzed in search of the most variable and the most discriminative loci within Stipa. The results showed that the problem with selecting a good barcode locus for feather grasses lies in the very low level of genetic diversity within its plastome. None of the single chloroplast loci is polymorphic enough to play a role of a barcode or a phylogenetic marker for Stipa. The biggest number of taxa was successfully identified by the analysis of 600 bp long DNA fragment comprising a part of rbcL gene, the complete rbcL-rpl23 spacer and a part of rpl23 gene. The effectiveness of multi-locus barcode composed of six best-performing loci for Stipa (ndhH, rpl23, ndhF-rpl32, rpl32-ccsA, psbK-psbI and petA-psbJ) didn't reach 70% of analyzed taxa. The analysis of complete plastome sequences as a super-barcode for Stipa although much more effective, still didn't allow for discrimination of all the analyzed taxa of feather grasses.
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